ATTED-II : GeneID search result

[←][→] ath AT5G47250 Gene

functional annotation

Function

LRR and NB-ARC domains-containing disease resistance protein

GO BP

GO:0006952 [list] [network] defense response

(1420 genes)

IBA

GO CC

GO:0005829 [list] [network] cytosol	(3506 genes)	HDA
GO:0005739 [list] [network] mitochondrion	(4405 genes)	IDA

GO MF

GO:0043531 [list] [network] ADP binding	(127 genes)	IEA
GO:0005524 [list] [network] ATP binding	(2003 genes)	IEA

KEGG

Protein

NP_199536.1

BLAST

NP_199536.1

Orthologous

[Ortholog page] AT3G15700 (ath) AT4G10780 (ath) RPS2 (ath) AT5G05400 (ath) AT5G43730 (ath) AT5G43740 (ath) AT5G47260 (ath) AT5G63020 (ath) RFL1 (ath) RPS5 (ath) SUMM2 (ath) AT1G12290 (ath) AT1G15890 (ath) AT1G51480 (ath) AT1G52660 (ath) AT1G61180 (ath) AT1G61190 (ath) AT1G61300 (ath) AT1G61310 (ath) AT1G62630 (ath) AT1G63350 (ath) AT1G63360 (ath) LOC4325415 (osa) LOC4325862 (osa) LOC4336120 (osa) LOC4346585 (osa) LOC4346689 (osa) LOC7461677 (ppo) LOC7481694 (ppo) LOC9272234 (osa) LOC11421862 (mtr) LOC11424413 (mtr) LOC25482383 (mtr) LOC25497292 (mtr) LOC100241155 (vvi) LOC100241167 (vvi) LOC100241170 (vvi) LOC100241235 (vvi) LOC100242696 (vvi) LOC100242909 (vvi) LOC100246150 (vvi) LOC100246240 (vvi) LOC100246379 (vvi) LOC100247196 (vvi) LOC100248038 (vvi) LOC100248105 (vvi) LOC100249639 (vvi) LOC100249841 (vvi) LOC100251408 (vvi) LOC100251433 (vvi) LOC100254298 (vvi) LOC100254678 (vvi) LOC100254876 (vvi) LOC100254908 (vvi) LOC100254970 (vvi) LOC100257093 (vvi) LOC100258255 (vvi) LOC100258314 (vvi) LOC100259933 (vvi) LOC100260007 (vvi) LOC100260098 (vvi) LOC100261532 (vvi) LOC100261679 (vvi) LOC100263309 (vvi) LOC100263392 (vvi) LOC100264978 (vvi) LOC100265187 (vvi) LOC100265292 (vvi) LOC100265363 (vvi) LOC100265494 (vvi) LOC100267014 (vvi) LOC100781638 (gma) LOC100854107 (vvi) LOC103646229 (zma) LOC103651126 (zma) LOC103830034 (bra) LOC103836180 (bra) LOC103836336 (bra) LOC103836666 (bra) LOC103838035 (bra) LOC103839728 (bra) LOC103840547 (bra) LOC103840924 (bra) LOC103840985 (bra) LOC103842806 (bra) LOC103843137 (bra) LOC103843140 (bra) LOC103843141 (bra) LOC103843147 (bra) LOC103843924 (bra) LOC103862247 (bra) LOC103863856 (bra) LOC103867876 (bra) LOC103871198 (bra) LOC103871262 (bra) LOC103871332 (bra) LOC103871360 (bra) LOC103871361 (bra) LOC103872209 (bra) LOC103872389 (bra) LOC104877773 (vvi) LOC104880229 (vvi) LOC104880238 (vvi) LOC104880253 (vvi) LOC104880254 (vvi) LOC104880301 (vvi) LOC104880723 (vvi) LOC107275341 (osa) LOC107275558 (osa) LOC107276074 (osa) LOC107277809 (osa) LOC107278834 (osa) LOC109119058 (sly) LOC109123115 (vvi) LOC109123129 (vvi) LOC109123132 (vvi) LOC109123189 (vvi)

Subcellular
localization
wolf

cyto 3, E.R. 3, cyto_E.R. 3, nucl 2, E.R._plas 2, cyto_plas 2

(predict for NP_199536.1)

Subcellular
localization
TargetP

other 5, scret 4

(predict for NP_199536.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with AT5G47250 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
4.3	AT5G52540	keratin-associated protein, putative (DUF819)	[detail]	835330
3.7	AT5G59670	Leucine-rich repeat protein kinase family protein	[detail]	836088
3.7	AT4G08690	Sec14p-like phosphatidylinositol transfer family protein	[detail]	826436

Coexpressed
gene list

[Coexpressed gene list for AT5G47250]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

248835_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

248835_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

248835_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	834772
Refseq ID (protein)	NP_199536.1

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