ATTED-II : GeneID search result

[←][→] ath AT1G52950 Gene

functional annotation

Function

Nucleic acid-binding, OB-fold-like protein

GO BP

GO:0007004 [list] [network] telomere maintenance via telomerase	(11 genes)	IBA
GO:0006268 [list] [network] DNA unwinding involved in DNA replication	(18 genes)	IBA
GO:0000723 [list] [network] telomere maintenance	(36 genes)	IBA
GO:0006289 [list] [network] nucleotide-excision repair	(46 genes)	IBA
GO:0000724 [list] [network] double-strand break repair via homologous recombination	(68 genes)	IBA
GO:0006261 [list] [network] DNA-dependent DNA replication	(94 genes)	IBA
GO:0051321 [list] [network] meiotic cell cycle	(166 genes)	IBA
GO:0006281 [list] [network] DNA repair	(295 genes)	IBA

GO CC

GO:0005662 [list] [network] DNA replication factor A complex	(8 genes)	IBA
GO:0000784 [list] [network] nuclear chromosome, telomeric region	(23 genes)	IBA
GO:0009506 [list] [network] plasmodesma	(962 genes)	IDA
GO:0005634 [list] [network] nucleus	(10793 genes)	ISM

GO MF

GO:0043047 [list] [network] single-stranded telomeric DNA binding	(11 genes)	IBA
GO:0003684 [list] [network] damaged DNA binding	(40 genes)	IBA
GO:0003697 [list] [network] single-stranded DNA binding	(75 genes)	IBA
GO:0043565 [list] [network] sequence-specific DNA binding	(796 genes)	IBA

KEGG

ath03030 [list] [network] DNA replication (50 genes)

ath03420 [list] [network] Nucleotide excision repair (69 genes)

ath03430 [list] [network] Mismatch repair (39 genes)

ath03440 [list] [network] Homologous recombination (67 genes)

Protein

NP_175703.1

BLAST

NP_175703.1

Orthologous

[Ortholog page] AT2G05642 (ath) AT1G36920 (ath) LOC11406609 (mtr) LOC11408364 (mtr) LOC11411193 (mtr) LOC11413424 (mtr) LOC11414554 (mtr) LOC11421151 (mtr) LOC11423576 (mtr) LOC11423821 (mtr) LOC11426299 (mtr) LOC11427578 (mtr) LOC11428542 (mtr) LOC11429204 (mtr) LOC11433140 (mtr) LOC11437536 (mtr) LOC11439845 (mtr) LOC11440329 (mtr) LOC11445665 (mtr) LOC25480302 (mtr) LOC25490647 (mtr) LOC25494382 (mtr) LOC25497071 (mtr) LOC25497246 (mtr) LOC25499221 (mtr) LOC25502413 (mtr) LOC25502584 (mtr) AT3G31925 (ath) LOC102661586 (gma) LOC102665320 (gma) LOC102665862 (gma) LOC103828487 (bra) LOC103828855 (bra) LOC103829624 (bra) LOC103834422 (bra) LOC103838599 (bra) LOC103838872 (bra) LOC103840324 (bra) LOC103841512 (bra) LOC103843191 (bra) LOC103844454 (bra) LOC103844472 (bra) LOC103844716 (bra) LOC103847572 (bra) LOC103848027 (bra) LOC103848281 (bra) LOC103848611 (bra) LOC103849406 (bra) LOC103849437 (bra) LOC103849600 (bra) LOC103849831 (bra) LOC103852270 (bra) LOC103852271 (bra) LOC103853394 (bra) LOC103854069 (bra) LOC103854333 (bra) LOC103854407 (bra) LOC103856770 (bra) LOC103858183 (bra) LOC103859363 (bra) LOC103859371 (bra) LOC103859768 (bra) LOC103860067 (bra) LOC103862601 (bra) LOC103862602 (bra) LOC103864135 (bra) LOC103866302 (bra) LOC103868529 (bra) LOC103868751 (bra) LOC103868994 (bra) LOC103869327 (bra) LOC103869697 (bra) LOC103872945 (bra) LOC103873451 (bra) LOC103873796 (bra) LOC103874265 (bra) LOC103874369 (bra) LOC103874802 (bra) LOC108868781 (bra) LOC108869144 (bra) LOC108869319 (bra) LOC108869803 (bra) LOC108870331 (bra) LOC108870490 (bra) LOC108870491 (bra) LOC108870568 (bra) LOC108870581 (bra) LOC108870781 (bra) LOC108871207 (bra) LOC108871405 (bra) LOC108871881 (bra) LOC108871891 (bra) LOC108872368 (bra) LOC109119302 (sly) LOC112416537 (mtr) LOC112416738 (mtr) LOC112417410 (mtr) LOC112418000 (mtr) LOC112418097 (mtr) LOC112422106 (mtr) LOC112422829 (mtr)

Subcellular
localization
wolf

nucl 8, cyto 2

(predict for NP_175703.1)

Subcellular
localization
TargetP

other 9

(predict for NP_175703.1)

Gene coexpression

Network^*for
coexpressed
genes

Coexpressed
gene list

[Coexpressed gene list for AT1G52950]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

261342_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

261342_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

261342_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	841728
Refseq ID (protein)	NP_175703.1

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