[←][→] ath   At1g17630 Gene
functional annotation
Function   Pentatricopeptide repeat (PPR-like) superfamily protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0031930 [list] [network] mitochondria-nucleus signaling pathway  (12 genes)  IGI  
GO CC
GO:0005739 [list] [network] mitochondrion  (4228 genes)  ISM  
GO MF
KEGG
Protein NP_001319030.1  NP_173207.1 
BLAST NP_001319030.1  NP_173207.1 
Orthologous [Ortholog page] LOC25491369 (mtr)  LOC100815287 (gma)  LOC101264439 (sly)  LOC103872545 (bra)  LOC107275931 (osa)  LOC123443123 (hvu) 
Subcellular
localization
wolf
plas 7,  nucl 1,  mito 1,  E.R. 1,  pero 1  (predict for NP_001319030.1)
plas 7,  nucl 1,  mito 1,  E.R. 1,  pero 1  (predict for NP_173207.1)
Subcellular
localization
TargetP
mito 7  (predict for NP_001319030.1)
mito 7  (predict for NP_173207.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT1G17630 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
11.0 AT3G53360 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 824504
10.7 AT4G16835 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 827390
10.5 AT3G02330 Pentatricopeptide repeat (PPR) superfamily protein [detail] 821115
7.9 AT1G53600 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 841795
7.4 AT1G03540 Pentatricopeptide repeat (PPR-like) superfamily protein [detail] 839466
5.9 AT1G50270 Pentatricopeptide repeat (PPR) superfamily protein [detail] 841449
Coexpressed
gene list		 [Coexpressed gene list for AT1G17630]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
260736_at
260736_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
260736_at
260736_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
260736_at
260736_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 838340      
Refseq ID (protein) NP_001319030.1 
NP_173207.1 


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