[][] ath   AT1G20260 Gene
functional annotation
Function   ATPase, V1 complex, subunit B protein
GO BP
GO:0030835 [list] [network] negative regulation of actin filament depolymerization  (13 genes)  IDA  
GO:0051693 [list] [network] actin filament capping  (13 genes)  IDA  
GO:0051017 [list] [network] actin filament bundle assembly  (20 genes)  IDA  
GO:1902600 [list] [network] proton transmembrane transport  (66 genes)  IEA  
GO:0046034 [list] [network] ATP metabolic process  (112 genes)  IEA  
GO CC
GO:0033180 [list] [network] proton-transporting V-type ATPase, V1 domain  (7 genes)  IEA  
GO:0005774 [list] [network] vacuolar membrane  (624 genes)  IDA  
GO:0005773 [list] [network] vacuole  (1133 genes)  IDA  
GO:0005794 [list] [network] Golgi apparatus  (1430 genes)  IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA RCA  
GO:0005886 [list] [network] plasma membrane  (3771 genes)  ISM  
GO:0005634 [list] [network] nucleus  (10793 genes)  HDA  
GO MF
GO:0051015 [list] [network] actin filament binding  (47 genes)  IDA  
GO:0005524 [list] [network] ATP binding  (2003 genes)  IEA  
GO:0016787 [list] [network] hydrolase activity  (3024 genes)  IEA  
KEGG ath00190 [list] [network] Oxidative phosphorylation (142 genes)
ath04145 [list] [network] Phagosome (82 genes)
Protein NP_173451.5 
BLAST NP_173451.5 
Orthologous [Ortholog page] VAB2 (ath)VAB1 (ath)LOC4327833 (osa)LOC4341339 (osa)LOC7470417 (ppo)LOC7474990 (ppo)LOC11426878 (mtr)LOC25485635 (mtr)LOC100243574 (vvi)LOC100257413 (vvi)LOC100282598 (zma)LOC100286306 (zma)LOC100791429 (gma)LOC100793764 (gma)LOC100804483 (gma)LOC100814088 (gma)LOC101244132 (sly)LOC101245703 (sly)LOC103829438 (bra)LOC103832047 (bra)LOC103872821 (bra)LOC108869119 (bra)
Subcellular
localization
wolf
cyto 9,  chlo 1,  cysk_plas 1  (predict for NP_173451.5)
Subcellular
localization
TargetP
other 8  (predict for NP_173451.5)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 10
ath04145 Phagosome 10
ath01200 Carbon metabolism 3
ath01230 Biosynthesis of amino acids 2
Genes directly connected with VAB3 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
11.5 VHA-A vacuolar ATP synthase subunit A [detail] 844228
9.0 VAB1 ATPase, V1 complex, subunit B protein [detail] 843934
8.8 TUF vacuolar ATP synthase subunit E1 [detail] 826716
6.5 AT2G44060 Late embryogenesis abundant protein, group 2 [detail] 819011
6.1 G6PD5 glucose-6-phosphate dehydrogenase 5 [detail] 822349
5.9 OASA1 O-acetylserine (thiol) lyase (OAS-TL) [detail] 827145
5.7 ATMPK8 Protein kinase superfamily protein [detail] 838394
5.3 XBCP3 xylem bark cysteine peptidase 3 [detail] 837517
Coexpressed
gene list
[Coexpressed gene list for VAB3]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 838614    
Refseq ID (protein) NP_173451.5 


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