[←][→] ath   AT1G29900 Gene
functional annotation
Function   carbamoyl phosphate synthetase B  
GO BP
GO:0044205 [list] [network] 'de novo' UMP biosynthetic process  (6 genes)  IEA  
GO:0006526 [list] [network] arginine biosynthetic process  (11 genes)  IEA NAS  
GO:0006541 [list] [network] glutamine metabolic process  (29 genes)  IBA  
GO:0016036 [list] [network] cellular response to phosphate starvation  (110 genes)  IEP  
GO:0006807 [list] [network] nitrogen compound metabolic process  (6704 genes)  IBA  
GO CC
GO:0005951 [list] [network] carbamoyl-phosphate synthase complex  (2 genes)  IDA  
GO:0009570 [list] [network] chloroplast stroma  (750 genes)  IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  RCA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  HDA IDA ISM  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IBA  
GO MF
GO:0004088 [list] [network] carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity  (2 genes)  IBA IDA  
GO:0005524 [list] [network] ATP binding  (2003 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
KEGG ath00240 [list] [network] Pyrimidine metabolism (57 genes)
ath00250 [list] [network] Alanine, aspartate and glutamate metabolism (51 genes)
Protein NP_564338.1 
BLAST NP_564338.1 
Orthologous [Ortholog page] LOC4326346 (osa)  LOC7475373 (ppo)  LOC11418051 (mtr)  LOC100262205 (vvi)  LOC100797877 (gma)  LOC100819867 (gma)  LOC101259343 (sly)  LOC103636016 (zma)  LOC103651512 (zma)  LOC103840449 (bra) 
Subcellular
localization
wolf
chlo 9  (predict for NP_564338.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_564338.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 2
ath03420 Nucleotide excision repair 2
ath04120 Ubiquitin mediated proteolysis 2
ath01230 Biosynthesis of amino acids 2
ath03013 RNA transport 2
Genes directly connected with CARB on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
12.5 AT1G09620 ATP binding/leucine-tRNA ligases/aminoacyl-tRNA ligase [detail] 837489
12.1 PUR4 purine biosynthesis 4 [detail] 843766
9.4 AT5G64420 DNA polymerase V family [detail] 836563
6.0 MTO2 Pyridoxal-5'-phosphate-dependent enzyme family protein [detail] 829106
Coexpressed
gene list		 [Coexpressed gene list for CARB]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
256002_at
256002_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
256002_at
256002_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
256002_at
256002_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 839868      
Refseq ID (protein) NP_564338.1 


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