[←][→] ath   AT1G56070 Gene
functional annotation
Function   Ribosomal protein S5/Elongation factor G/III/V family protein  
GO BP
GO:0009631 [list] [network] cold acclimation  (59 genes)  IMP  
GO:0009409 [list] [network] response to cold  (411 genes)  IMP  
GO:0006414 [list] [network] translational elongation  (693 genes)  IBA IEA  
GO CC
GO:0005730 [list] [network] nucleolus  (477 genes)  IDA  
GO:0005774 [list] [network] vacuolar membrane  (624 genes)  IDA  
GO:1990904 [list] [network] ribonucleoprotein complex  (690 genes)  IBA  
GO:0009506 [list] [network] plasmodesma  (962 genes)  IDA  
GO:0005794 [list] [network] Golgi apparatus  (1430 genes)  RCA  
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA IBA IDA  
GO:0005886 [list] [network] plasma membrane  (3771 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  HDA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0043022 [list] [network] ribosome binding  (43 genes)  IBA  
GO:0003746 [list] [network] translation elongation factor activity  (48 genes)  IBA  
GO:0003924 [list] [network] GTPase activity  (169 genes)  IBA  
GO:0005507 [list] [network] copper ion binding  (185 genes)  IDA  
GO:0005525 [list] [network] GTP binding  (248 genes)  IEA  
GO:0003729 [list] [network] mRNA binding  (1026 genes)  IDA  
KEGG
Protein NP_001321033.1  NP_001321034.1  NP_849818.1 
BLAST NP_001321033.1  NP_001321034.1  NP_849818.1 
Orthologous [Ortholog page] FH3 (ath)  NRPD4 (ath)  AT4G16150 (ath)  AT4G35335 (ath)  AT3G12915 (ath)  AT4G17100 (ath)  LOC4324669 (osa)  LOC4326544 (osa)  LOC4329493 (osa)  LOC4334959 (osa)  LOC7483076 (ppo)  LOC7492112 (ppo)  LOC11406801 (mtr)  LOC11408360 (mtr)  LOC11415386 (mtr)  LOC25483153 (mtr)  LOC100261253 (vvi)  LOC100272648 (zma)  LOC100285098 (zma)  LOC100788357 (gma)  LOC100804251 (gma)  LOC101254320 (sly)  LOC103644298 (zma)  LOC103644301 (zma)  LOC103835224 (bra)  LOC103854706 (bra)  LOC103865495 (bra) 
Subcellular
localization
wolf
cyto 5,  nucl 2,  chlo 1,  cysk_nucl 1  (predict for NP_001321033.1)
cyto 5,  nucl 2,  chlo 1,  cysk_nucl 1  (predict for NP_001321034.1)
cyto 5,  nucl 2,  chlo 1,  cysk_nucl 1  (predict for NP_849818.1)
Subcellular
localization
TargetP
other 8,  mito 3  (predict for NP_001321033.1)
other 8,  mito 3  (predict for NP_001321034.1)
other 8,  mito 3  (predict for NP_849818.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 RNA transport 11
ath03010 Ribosome 2
Genes directly connected with LOS1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
12.0 AT5G60390 GTP binding Elongation factor Tu family protein [detail] 836161
11.1 EIF3C eukaryotic translation initiation factor 3C [detail] 824781
10.4 EIF4A1 eukaryotic translation initiation factor 4A1 [detail] 820605
10.3 PUR4 purine biosynthesis 4 [detail] 843766
8.0 EIF4A-2 eif4a-2 [detail] 841868
7.1 AT3G08943 ARM repeat superfamily protein [detail] 3768764
Coexpressed
gene list		 [Coexpressed gene list for LOS1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
262064_at
262064_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
262064_at
262064_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
262064_at
262064_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 842058      
Refseq ID (protein) NP_001321033.1 
NP_001321034.1 
NP_849818.1 


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