[←][→] ath   AT1G59760 Gene
functional annotation
Function   RNA helicase, ATP-dependent, SK12/DOB1 protein  
GO BP
GO:0031125 [list] [network] rRNA 3'-end processing  (11 genes)  IMP  
GO:0000460 [list] [network] maturation of 5.8S rRNA  (18 genes)  IBA  
GO:0006401 [list] [network] RNA catabolic process  (97 genes)  IBA  
GO:0006364 [list] [network] rRNA processing  (276 genes)  IMP  
GO CC
GO:0005654 [list] [network] nucleoplasm  (444 genes)  IDA  
GO:0005730 [list] [network] nucleolus  (477 genes)  IEA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA IDA ISM  
GO MF
GO:0003724 [list] [network] RNA helicase activity  (75 genes)  IEA  
GO:0019843 [list] [network] rRNA binding  (99 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2003 genes)  IEA  
KEGG ath03018 [list] [network] RNA degradation (113 genes)
Protein NP_176185.1 
BLAST NP_176185.1 
Orthologous [Ortholog page] LOC9268439 (osa)  LOC11442551 (mtr)  LOC100258243 (vvi)  LOC100804792 (gma)  LOC101257307 (sly)  LOC103638180 (zma)  LOC103829199 (bra)  LOC103838580 (bra) 
Subcellular
localization
wolf
nucl 4,  chlo 3,  cyto_nucl 3  (predict for NP_176185.1)
Subcellular
localization
TargetP
other 8  (predict for NP_176185.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 3
Genes directly connected with MTR4 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.9 AT1G06900 Insulinase (Peptidase family M16) family protein [detail] 837200
8.5 AT5G64420 DNA polymerase V family [detail] 836563
7.6 AtNug2 GTP-binding family protein [detail] 841731
6.7 DEG9 DegP protease 9 [detail] 834018
Coexpressed
gene list		 [Coexpressed gene list for MTR4]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
262906_at
262906_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
262906_at
262906_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
262906_at
262906_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 842269      
Refseq ID (protein) NP_176185.1 


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