[←][→] ath   AT1G62310 Gene
functional annotation
Function   transcription factor jumonji (jmjC) domain-containing protein  
GO BP
GO:0033169 [list] [network] histone H3-K9 demethylation  (7 genes)  IBA  
GO CC
GO:0000785 [list] [network] chromatin  (160 genes)  IBA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA ISM  
GO MF
GO:0032454 [list] [network] histone demethylase activity (H3-K9 specific)  (5 genes)  IBA  
GO:0031490 [list] [network] chromatin DNA binding  (27 genes)  IBA  
GO:0000976 [list] [network] transcription regulatory region sequence-specific DNA binding  (204 genes)  IBA  
KEGG
Protein NP_176421.1 
BLAST NP_176421.1 
Orthologous [Ortholog page] AT1G11950 (ath)  LOC4346966 (osa)  LOC11440103 (mtr)  LOC25486220 (mtr)  LOC25486222 (mtr)  LOC25486224 (mtr)  LOC100250303 (vvi)  LOC100797860 (gma)  LOC100801772 (gma)  LOC100806419 (gma)  LOC101254269 (sly)  LOC103836196 (bra)  LOC103838408 (bra)  LOC103848169 (bra)  LOC107278851 (osa)  LOC115072891 (zma) 
Subcellular
localization
wolf
nucl 9  (predict for NP_176421.1)
Subcellular
localization
TargetP
chlo 6  (predict for NP_176421.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
ath03015 mRNA surveillance pathway 2
Genes directly connected with AT1G62310 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.1 AT5G15270 RNA-binding KH domain-containing protein [detail] 831379
7.0 AT2G42330 GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain-containing protein [detail] 818834
6.4 AT2G39580 zinc finger C3H1 domain protein [detail] 818543
5.1 AT3G49550 hypothetical protein [detail] 824117
Coexpressed
gene list		 [Coexpressed gene list for AT1G62310]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
260627_at
260627_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
260627_at
260627_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
260627_at
260627_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 842529      
Refseq ID (protein) NP_176421.1 


The preparation time of this page was 0.1 [sec].