[←][→] ath   AT1G65060 Gene
functional annotation
Function   4-coumarate:CoA ligase 3  
GO BP
GO:0010584 [list] [network] pollen exine formation  (30 genes)  IMP  
GO:0009411 [list] [network] response to UV  (120 genes)  IEP  
GO:0009698 [list] [network] phenylpropanoid metabolic process  (124 genes)  TAS  
GO:0009611 [list] [network] response to wounding  (212 genes)  IEP  
GO:0050832 [list] [network] defense response to fungus  (517 genes)  IEP  
GO CC
GO:0009507 [list] [network] chloroplast  (5095 genes)  ISM  
GO MF
GO:0016207 [list] [network] 4-coumarate-CoA ligase activity  (13 genes)  IDA  
GO:0005524 [list] [network] ATP binding  (2003 genes)  IEA  
KEGG ath00130 [list] [network] Ubiquinone and other terpenoid-quinone biosynthesis (38 genes)
ath00940 [list] [network] Phenylpropanoid biosynthesis (166 genes)
ath00999 [list] [network] Biosynthesis of secondary metabolites - unclassified (12 genes)
Protein NP_176686.1  NP_849844.1 
BLAST NP_176686.1  NP_849844.1 
Orthologous [Ortholog page] 4CL3 (gma)  4CL4 (gma)  LOC4330407 (osa)  LOC7469843 (ppo)  LOC11426040 (mtr)  4CL (vvi)  LOC101251363 (sly)  LOC103653944 (zma)  LOC103831048 (bra) 
Subcellular
localization
wolf
chlo 3,  E.R. 2,  nucl 1,  chlo_mito 1,  cysk_nucl 1,  E.R._vacu 1,  E.R._plas 1,  cyto_E.R. 1  (predict for NP_176686.1)
chlo 3,  nucl 1,  chlo_mito 1,  cyto 1,  cysk_nucl 1,  mito 1,  plas 1,  extr 1,  vacu 1,  E.R. 1,  E.R._vacu 1,  cyto_pero 1,  E.R._plas 1,  mito_plas 1  (predict for NP_849844.1)
Subcellular
localization
TargetP
other 8,  chlo 3  (predict for NP_176686.1)
other 8,  chlo 3  (predict for NP_849844.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00941 Flavonoid biosynthesis 6
ath00944 Flavone and flavonol biosynthesis 3
ath00940 Phenylpropanoid biosynthesis 2
Genes directly connected with 4CL3 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
18.5 FLS1 flavonol synthase 1 [detail] 830765
18.0 CHIL Chalcone-flavanone isomerase family protein [detail] 830409
15.9 TT5 Chalcone-flavanone isomerase family protein [detail] 824678
12.5 AT5G62210 Embryo-specific protein 3, (ATS3) [detail] 836342
10.5 UGT78D2 UDP-glucosyl transferase 78D2 [detail] 831568
9.9 UGT84A1 UDP-Glycosyltransferase superfamily protein [detail] 827220
9.6 AT5G17010 Major facilitator superfamily protein [detail] 831564
9.5 KAT5 peroxisomal 3-keto-acyl-CoA thiolase 2 [detail] 834946
8.5 AT2G23910 NAD(P)-binding Rossmann-fold superfamily protein [detail] 816923
8.3 RHM1 rhamnose biosynthesis 1 [detail] 844193
7.8 UGT84A2 UDP-Glycosyltransferase superfamily protein [detail] 821710
7.0 AAE18 acyl-activating enzyme 18 [detail] 841977
6.0 UGT78D1 UDP-glucosyl transferase 78D1 [detail] 839933
5.8 MYB111 myb domain protein 111 [detail] 834993
Coexpressed
gene list		 [Coexpressed gene list for 4CL3]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
261907_at
261907_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
261907_at
261907_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
261907_at
261907_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 842814      
Refseq ID (protein) NP_176686.1 
NP_849844.1 


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