[←][→] ath   AT1G71770 Gene
functional annotation
Function   poly(A)-binding protein 5  
GO BP
GO:0000289 [list] [network] nuclear-transcribed mRNA poly(A) tail shortening  (6 genes)  IGI  
GO:0006413 [list] [network] translational initiation  (95 genes)  IGI  
GO:0006417 [list] [network] regulation of translation  (146 genes)  IEA  
GO CC
GO:1990904 [list] [network] ribonucleoprotein complex  (690 genes)  IBA  
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA IBA IDA  
GO:0005739 [list] [network] mitochondrion  (4405 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA IDA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IBA  
GO MF
GO:0003730 [list] [network] mRNA 3'-UTR binding  (14 genes)  IBA  
GO:0008143 [list] [network] poly(A) binding  (19 genes)  IBA IDA  
GO:0008266 [list] [network] poly(U) RNA binding  (28 genes)  IBA  
GO:0003743 [list] [network] translation initiation factor activity  (95 genes)  ISS  
GO:0003723 [list] [network] RNA binding  (1790 genes)  IBA  
KEGG ath03013 [list] [network] RNA transport (171 genes)
ath03015 [list] [network] mRNA surveillance pathway (115 genes)
ath03018 [list] [network] RNA degradation (113 genes)
Protein NP_001185373.1  NP_177322.2 
BLAST NP_001185373.1  NP_177322.2 
Orthologous [Ortholog page] PAB4 (ath)  PAB2 (ath)  PAB3 (ath)  PAB8 (ath)  LOC4336331 (osa)  LOC4341408 (osa)  LOC4345242 (osa)  LOC4346409 (osa)  LOC7467793 (ppo)  LOC7490046 (ppo)  LOC7492048 (ppo)  LOC7492495 (ppo)  LOC11419187 (mtr)  LOC11429679 (mtr)  LOC11445084 (mtr)  LOC25485028 (mtr)  LOC25496270 (mtr)  LOC100241923 (vvi)  LOC100255846 (vvi)  LOC100262903 (vvi)  LOC100263065 (vvi)  LOC100285420 (zma)  LOC100381531 (zma)  LOC100383542 (zma)  LOC100502035 (zma)  LOC100778879 (gma)  LOC100780329 (gma)  LOC100783163 (gma)  LOC100784442 (gma)  LOC100798998 (gma)  LOC100808877 (gma)  LOC100811385 (gma)  LOC100813735 (gma)  LOC101258105 (sly)  LOC101261596 (sly)  LOC101264108 (sly)  LOC103641822 (zma)  LOC103830833 (bra)  LOC103831686 (bra)  LOC103834441 (bra)  LOC103835691 (bra)  LOC103842244 (bra)  LOC103842418 (bra)  LOC103844362 (bra)  LOC103860422 (bra)  LOC103871402 (bra) 
Subcellular
localization
wolf
pero 4,  cyto 3,  cyto_nucl 3,  nucl 1,  E.R. 1  (predict for NP_001185373.1)
pero 4,  cyto 3,  cyto_nucl 3,  nucl 1,  E.R. 1  (predict for NP_177322.2)
Subcellular
localization
TargetP
other 6  (predict for NP_001185373.1)
other 6  (predict for NP_177322.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 RNA transport 3
ath03015 mRNA surveillance pathway 3
ath03018 RNA degradation 3
Genes directly connected with PAB5 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.5 PAB3 poly(A) binding protein 3 [detail] 838882
4.9 AGO5 Argonaute family protein [detail] 817334
4.5 CALS5 callose synthase 5 [detail] 815852
Coexpressed
gene list		 [Coexpressed gene list for PAB5]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
261511_at
261511_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
261511_at
261511_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
261511_at
261511_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 843507      
Refseq ID (protein) NP_001185373.1 
NP_177322.2 


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