[←][→] ath   At2g02470 Gene
functional annotation
Function   alfin-like 6    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0048767 [list] [network] root hair elongation  (78 genes)  IMP  
GO:0016036 [list] [network] cellular response to phosphate starvation  (111 genes)  IMP  
GO:0055065 [list] [network] metal ion homeostasis  (160 genes)  IMP  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1656 genes)  IEA  
GO CC
GO:0005739 [list] [network] mitochondrion  (4228 genes)  ISM  
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA ISM  
GO MF
GO:0035064 [list] [network] methylated histone binding  (21 genes)  ISS  
GO:0000976 [list] [network] transcription cis-regulatory region binding  (708 genes)  IPI  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_001189502.1  NP_001323925.1  NP_178351.1 
BLAST NP_001189502.1  NP_001323925.1  NP_178351.1 
Orthologous [Ortholog page] AL3 (ath)  AL5 (ath)  AL4 (ath)  AL7 (ath)  LOC4324896 (osa)  LOC4335954 (osa)  LOC4338816 (osa)  LOC4343868 (osa)  LOC4350183 (osa)  LOC7476667 (ppo)  LOC7478178 (ppo)  LOC7496695 (ppo)  LOC7497594 (ppo)  LOC9269003 (osa)  LOC11433421 (mtr)  LOC18109476 (ppo)  LOC25481987 (mtr)  LOC25486461 (mtr)  LOC25494361 (mtr)  LOC25500530 (mtr)  LOC100125735 (tae)  LOC100170695 (gma)  LOC100170696 (gma)  PHD4 (gma)  LOC100170698 (gma)  PHD6 (gma)  LOC100170700 (gma)  fin1 (sly)  LOC100500110 (gma)  LOC100777146 (gma)  LOC100794662 (gma)  LOC100797908 (gma)  LOC100807826 (gma)  LOC101248114 (sly)  LOC101248299 (sly)  LOC101250743 (sly)  LOC101259267 (sly)  LOC101264911 (sly)  LOC103827517 (bra)  LOC103836071 (bra)  LOC103837114 (bra)  LOC103839442 (bra)  LOC103842964 (bra)  LOC103845671 (bra)  LOC103848022 (bra)  LOC103851351 (bra)  LOC103854705 (bra)  LOC103874455 (bra)  LOC123044245 (tae)  LOC123056239 (tae)  LOC123062912 (tae)  LOC123071781 (tae)  LOC123080104 (tae)  LOC123086763 (tae)  LOC123091217 (tae)  LOC123096202 (tae)  LOC123133607 (tae)  LOC123182057 (tae)  LOC123187982 (tae)  LOC123425355 (hvu)  LOC123442808 (hvu)  LOC123445099 (hvu)  LOC123447832 (hvu) 
Subcellular
localization
wolf
chlo 5,  cyto 2,  mito 1,  extr 1,  pero 1,  cysk 1  (predict for NP_001189502.1)
nucl 4,  cyto 2,  chlo 1,  plas 1,  extr 1,  pero 1,  cysk 1,  cysk_plas 1  (predict for NP_001323925.1)
chlo 6,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for NP_178351.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001189502.1)
other 8  (predict for NP_001323925.1)
other 8  (predict for NP_178351.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
ath03015 mRNA surveillance pathway 2
ath03020 RNA polymerase 2
ath03018 RNA degradation 2
Genes directly connected with AL6 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.3 AL7 alfin-like 7 [detail] 838013
5.8 CBP20 CAP-binding protein 20 [detail] 834443
5.7 NF-YB1 nuclear factor Y, subunit B1 [detail] 818472
Coexpressed
gene list		 [Coexpressed gene list for AL6]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
266180_at
266180_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
266180_at
266180_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
266180_at
266180_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 814776      
Refseq ID (protein) NP_001189502.1 
NP_001323925.1 
NP_178351.1 


The preparation time of this page was 0.5 [sec].