[←][→] ath   At3g42790 Gene
functional annotation
Function   alfin-like 3      
GO BP
GO:0010629 [list] [network] negative regulation of gene expression  (396 genes)  IEA  
GO:0002376 [list] [network] immune system process  (453 genes)  IEA  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1656 genes)  IEA  
GO:0007165 [list] [network] signal transduction  (2054 genes)  IEA  
GO:0098542 [list] [network] defense response to other organism  (2060 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA ISM  
GO MF
GO:0035064 [list] [network] methylated histone binding  (21 genes)  ISS  
GO:0000976 [list] [network] transcription cis-regulatory region binding  (708 genes)  IPI  
KEGG
Protein NP_189865.1 
BLAST NP_189865.1 
Orthologous [Ortholog page] AL6 (ath)  AL5 (ath)  AL4 (ath)  AL7 (ath)  LOC4324896 (osa)  LOC4335954 (osa)  LOC4338816 (osa)  LOC4343868 (osa)  LOC4350183 (osa)  LOC7476667 (ppo)  LOC7478178 (ppo)  LOC7496695 (ppo)  LOC7497594 (ppo)  LOC9269003 (osa)  LOC11433421 (mtr)  LOC18109476 (ppo)  LOC25481987 (mtr)  LOC25486461 (mtr)  LOC25494361 (mtr)  LOC25500530 (mtr)  LOC100125735 (tae)  LOC100170695 (gma)  LOC100170696 (gma)  PHD4 (gma)  LOC100170698 (gma)  PHD6 (gma)  LOC100170700 (gma)  fin1 (sly)  LOC100500110 (gma)  LOC100777146 (gma)  LOC100794662 (gma)  LOC100797908 (gma)  LOC100807826 (gma)  LOC101248114 (sly)  LOC101248299 (sly)  LOC101250743 (sly)  LOC101259267 (sly)  LOC101264911 (sly)  LOC103827517 (bra)  LOC103836071 (bra)  LOC103837114 (bra)  LOC103839442 (bra)  LOC103842964 (bra)  LOC103845671 (bra)  LOC103848022 (bra)  LOC103851351 (bra)  LOC103854705 (bra)  LOC103874455 (bra)  LOC123044245 (tae)  LOC123056239 (tae)  LOC123062912 (tae)  LOC123071781 (tae)  LOC123080104 (tae)  LOC123086763 (tae)  LOC123091217 (tae)  LOC123096202 (tae)  LOC123133607 (tae)  LOC123182057 (tae)  LOC123187982 (tae)  LOC123425355 (hvu)  LOC123442808 (hvu)  LOC123445099 (hvu)  LOC123447832 (hvu) 
Subcellular
localization
wolf
chlo 7,  mito 2  (predict for NP_189865.1)
Subcellular
localization
TargetP
other 8  (predict for NP_189865.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
Genes directly connected with AL3 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
7.6 AT4G21450 PapD-like superfamily protein [detail] 826300
7.3 NCBP Putative cap-binding protein [detail] 831929
6.7 AT1G10590 Nucleic acid-binding, OB-fold-like protein [detail] 837601
6.5 AL7 alfin-like 7 [detail] 838013
5.8 LCV2 uncharacterized protein [detail] 840912
Coexpressed
gene list		 [Coexpressed gene list for AL3]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
252764_at
252764_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
252764_at
252764_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
252764_at
252764_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 823316      
Refseq ID (protein) NP_189865.1 


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