[←][→] ath   AT3G45630 Gene
functional annotation
Function   RNA binding (RRM/RBD/RNP motifs) family protein  
GO BP
GO:0016567 [list] [network] protein ubiquitination  (624 genes)  IBA  
GO CC
GO:0030014 [list] [network] CCR4-NOT complex  (21 genes)  IBA  
GO:0009506 [list] [network] plasmodesma  (962 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (434 genes)  IBA  
KEGG ath03018 [list] [network] RNA degradation (113 genes)
Protein NP_001327582.1  NP_190149.1 
BLAST NP_001327582.1  NP_190149.1 
Orthologous [Ortholog page] AT2G28540 (ath)  AT5G60170 (ath)  LOC4325536 (osa)  LOC4349535 (osa)  LOC4351244 (osa)  LOC7465293 (ppo)  LOC7488143 (ppo)  LOC11406476 (mtr)  LOC11417361 (mtr)  LOC25484052 (mtr)  LOC100267264 (vvi)  LOC100381591 (zma)  LOC100384257 (zma)  LOC100501174 (zma)  LOC100780302 (gma)  LOC100796804 (gma)  LOC100801880 (gma)  LOC100805811 (gma)  LOC100807521 (gma)  LOC100813427 (gma)  LOC101247127 (sly)  LOC101251877 (sly)  LOC101252746 (sly)  LOC101257555 (sly)  LOC103647171 (zma)  LOC103649602 (zma)  LOC103829751 (bra)  LOC103833848 (bra)  LOC103846171 (bra)  LOC103856582 (bra)  LOC103856584 (bra)  LOC103864897 (bra)  LOC103873411 (bra) 
Subcellular
localization
wolf
nucl 9  (predict for NP_001327582.1)
nucl 9  (predict for NP_190149.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001327582.1)
other 9  (predict for NP_190149.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 3
Genes directly connected with AT3G45630 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
11.0 AT5G60170 RNA binding (RRM/RBD/RNP motifs) family protein [detail] 836139
8.7 HAC12 histone acetyltransferase of the CBP family 12 [detail] 838242
7.9 SETH5 transducin family protein / WD-40 repeat family protein [detail] 828005
6.4 UBP8 ubiquitin-specific protease 8 [detail] 832263
6.3 AT1G22860 Vacuolar sorting protein 39 [detail] 838891
Coexpressed
gene list		 [Coexpressed gene list for AT3G45630]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
252588_at
252588_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
252588_at
252588_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
252588_at
252588_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 823705      
Refseq ID (protein) NP_001327582.1 
NP_190149.1 


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