[←][→] ath   At3g47820 Gene
functional annotation
Function   PLANT U-BOX 39      
GO BP
GO:0080167 [list] [network] response to karrikin  (4 genes)  IEA  
GO:0071417 [list] [network] cellular response to organonitrogen compound  (46 genes)  IEA  
GO:0035556 [list] [network] intracellular signal transduction  (233 genes)  IEA  
GO:0071407 [list] [network] cellular response to organic cyclic compound  (250 genes)  IEA  
GO:0010200 [list] [network] response to chitin  (304 genes)  IEA  
GO:0009639 [list] [network] response to red or far red light  (365 genes)  IEA  
GO:0009966 [list] [network] regulation of signal transduction  (396 genes)  IEA  
GO:0050832 [list] [network] defense response to fungus  (705 genes)  IEA  
GO:0031347 [list] [network] regulation of defense response  (749 genes)  IEA  
GO:0042742 [list] [network] defense response to bacterium  (980 genes)  IEA  
GO:1901701 [list] [network] cellular response to oxygen-containing compound  (1115 genes)  IEA  
GO:0032870 [list] [network] cellular response to hormone stimulus  (1136 genes)  IEA  
GO:0043436 [list] [network] oxoacid metabolic process  (1714 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
KEGG
Protein NP_190366.2 
BLAST NP_190366.2 
Orthologous [Ortholog page] AT5G40140 (ath)  AT5G62560 (ath)  PUB38 (ath)  LOC4340611 (osa)  LOC4346948 (osa)  LOC7453750 (ppo)  LOC7458016 (ppo)  LOC7495929 (ppo)  LOC11434906 (mtr)  LOC25489555 (mtr)  LOC100775869 (gma)  LOC100784564 (gma)  LOC100798675 (gma)  LOC100815075 (gma)  LOC101243948 (sly)  LOC101258053 (sly)  LOC103837417 (bra)  LOC103855018 (bra)  LOC103855284 (bra)  LOC103863953 (bra)  LOC103873200 (bra)  LOC107276525 (osa)  LOC123103659 (tae)  LOC123111877 (tae)  LOC123121438 (tae)  LOC123152078 (tae)  LOC123162339 (tae)  LOC123165193 (tae)  LOC123397172 (hvu)  LOC123398416 (hvu)  LOC123398732 (hvu)  LOC123405170 (hvu)  LOC123405335 (hvu)  LOC123405538 (hvu)  LOC123405876 (hvu)  LOC123409084 (hvu)  LOC123409348 (hvu)  LOC123409466 (hvu)  LOC123409895 (hvu)  LOC123428698 (hvu)  LOC123441604 (hvu)  LOC123450364 (hvu)  LOC123450640 (hvu) 
Subcellular
localization
wolf
chlo 4,  nucl 3,  mito 1,  cysk 1,  nucl_plas 1  (predict for NP_190366.2)
Subcellular
localization
TargetP
mito 4  (predict for NP_190366.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with PUB39 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
5.8 EXO70E1 exocyst subunit exo70 family protein E1 [detail] 822601
5.4 AT4G11300 ROH1, putative (DUF793) [detail] 826732
5.3 AT3G53810 Concanavalin A-like lectin protein kinase family protein [detail] 824548
Coexpressed
gene list		 [Coexpressed gene list for PUB39]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 823936      
Refseq ID (protein) NP_190366.2 


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