ATTED-II : GeneID search result

[←][→] ath At4g20830 Gene

functional annotation

Function

FAD-binding Berberine family protein

GO BP

GO:0006979 [list] [network] response to oxidative stress	(545 genes)	IEP
GO:0050832 [list] [network] defense response to fungus	(705 genes)	IMP

GO CC

GO:0048046 [list] [network] apoplast	(305 genes)	HDA
GO:0009505 [list] [network] plant-type cell wall	(498 genes)	HDA
GO:0009506 [list] [network] plasmodesma	(871 genes)	HDA
GO:0005773 [list] [network] vacuole	(971 genes)	HDA
GO:0005886 [list] [network] plasma membrane	(2529 genes)	HDA
GO:0005829 [list] [network] cytosol	(2559 genes)	HDA
GO:0005739 [list] [network] mitochondrion	(4228 genes)	HDA
GO:0009507 [list] [network] chloroplast	(5004 genes)	ISM

GO MF

GO:0016899 [list] [network] oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor	(17 genes)	IDA
GO:0071949 [list] [network] FAD binding	(43 genes)	IEA

KEGG

Protein

NP_193815.2 NP_974580.1

BLAST

NP_193815.2 NP_974580.1

Orthologous

[Ortholog page] LOC732592 (gma) LOC732593 (gma) MEE23 (ath) AT4G20800 (ath) AT4G20820 (ath) AT4G20840 (ath) AT4G20860 (ath) AT5G44360 (ath) AT5G44380 (ath) AT5G44390 (ath) AT5G44400 (ath) AT5G44410 (ath) AT5G44440 (ath) AT1G11770 (ath) AT1G26380 (ath) AT1G26390 (ath) AT1G26400 (ath) AT1G26410 (ath) AT1G26420 (ath) AT1G01980 (ath) AT1G30700 (ath) AT1G30710 (ath) AT1G30760 (ath) AT1G34575 (ath) LOC4341253 (osa) LOC4341254 (osa) LOC4341257 (osa) LOC4341259 (osa) LOC4341261 (osa) LOC7457662 (ppo) LOC7471680 (ppo) LOC7471681 (ppo) LOC7480379 (ppo) LOC7480381 (ppo) LOC7480383 (ppo) LOC7480394 (ppo) LOC7480395 (ppo) LOC7480398 (ppo) LOC7480399 (ppo) LOC7480401 (ppo) LOC7480403 (ppo) LOC7480406 (ppo) LOC7480408 (ppo) LOC7480409 (ppo) LOC7480417 (ppo) LOC7480418 (ppo) LOC7484482 (ppo) LOC7485160 (ppo) LOC7485161 (ppo) LOC7485205 (ppo) LOC7489102 (ppo) LOC7489103 (ppo) LOC7489112 (ppo) LOC7489114 (ppo) LOC7489115 (ppo) LOC7489116 (ppo) LOC7489117 (ppo) LOC11406991 (mtr) LOC11407647 (mtr) LOC11415235 (mtr) LOC11415951 (mtr) LOC11416804 (mtr) LOC11418784 (mtr) LOC11420001 (mtr) LOC11422032 (mtr) LOC11422989 (mtr) LOC11424412 (mtr) LOC11429520 (mtr) LOC18095776 (ppo) LOC18096028 (ppo) LOC18103477 (ppo) LOC18103479 (ppo) LOC18103480 (ppo) LOC18103481 (ppo) LOC18103482 (ppo) LOC18103487 (ppo) LOC18103492 (ppo) LOC18103495 (ppo) LOC18103496 (ppo) LOC18103497 (ppo) LOC18103499 (ppo) LOC18103509 (ppo) LOC18103510 (ppo) LOC18103511 (ppo) LOC18103513 (ppo) LOC18105648 (ppo) LOC18109453 (ppo) LOC25486180 (mtr) LOC25486316 (mtr) LOC25486318 (mtr) LOC25486319 (mtr) LOC25492422 (mtr) LOC25493091 (mtr) LOC25493334 (mtr) LOC25493352 (mtr) LOC25493353 (mtr) LOC25493354 (mtr) LOC25493355 (mtr) LOC25493356 (mtr) LOC25493357 (mtr) LOC25493364 (mtr) LOC25493365 (mtr) LOC25493366 (mtr) LOC25495604 (mtr) LOC100775353 (gma) LOC100775893 (gma) LOC100776438 (gma) LOC100777594 (gma) LOC100778568 (gma) LOC100779395 (gma) LOC100780114 (gma) LOC100780461 (gma) LOC100781004 (gma) LOC100781731 (gma) LOC100782093 (gma) LOC100782292 (gma) LOC100782631 (gma) LOC100786800 (gma) LOC100788228 (gma) LOC100788233 (gma) LOC100794074 (gma) LOC100796276 (gma) LOC100796809 (gma) LOC100797188 (gma) LOC100797739 (gma) LOC100799990 (gma) LOC100800519 (gma) LOC100801058 (gma) LOC100802131 (gma) LOC100803041 (gma) LOC100807459 (gma) LOC100807998 (gma) LOC100810481 (gma) LOC100811019 (gma) LOC100811558 (gma) LOC100812087 (gma) LOC100813175 (gma) LOC100813706 (gma) LOC101246398 (sly) LOC101246685 (sly) LOC101249413 (sly) LOC101249763 (sly) LOC101254601 (sly) LOC101254908 (sly) LOC101254965 (sly) LOC101255262 (sly) LOC101255854 (sly) LOC101256448 (sly) LOC101263376 (sly) LOC101263972 (sly) LOC101264289 (sly) LOC101264571 (sly) LOC101264701 (sly) LOC101265002 (sly) LOC101265308 (sly) LOC101265606 (sly) LOC102662170 (gma) LOC103827902 (bra) LOC103827906 (bra) LOC103828799 (bra) LOC103828803 (bra) LOC103834173 (bra) LOC103839175 (bra) LOC103839178 (bra) LOC103839179 (bra) LOC103839182 (bra) LOC103839321 (bra) LOC103839322 (bra) LOC103840305 (bra) LOC103840312 (bra) LOC103840313 (bra) LOC103840613 (bra) LOC103840614 (bra) LOC103841228 (bra) LOC103843225 (bra) LOC103850258 (bra) LOC103857550 (bra) LOC103858368 (bra) LOC103858377 (bra) LOC103858400 (bra) LOC103858408 (bra) LOC103858430 (bra) LOC103858724 (bra) LOC103861201 (bra) LOC103861202 (bra) LOC103865354 (bra) LOC103867418 (bra) LOC103871928 (bra) LOC104645788 (sly) LOC104646055 (sly) LOC107275394 (osa) LOC108869423 (bra) LOC112323320 (ppo) LOC112323321 (ppo) LOC112323322 (ppo) LOC112323328 (ppo) LOC112323330 (ppo) LOC112324786 (ppo) LOC112324789 (ppo) LOC112325984 (ppo) LOC112329148 (ppo) LOC112421407 (mtr) LOC117125831 (bra) LOC120580904 (mtr) LOC123039084 (tae) LOC123043821 (tae) LOC123044031 (tae) LOC123048809 (tae) LOC123051687 (tae) LOC123051908 (tae) LOC123056682 (tae) LOC123069860 (tae) LOC123101225 (tae) LOC123104138 (tae) LOC123121890 (tae) LOC123151640 (tae) LOC123151641 (tae) LOC123151651 (tae) LOC123154502 (tae) LOC123154697 (tae) LOC123159831 (tae) LOC123160014 (tae) LOC123160305 (tae) LOC123160322 (tae) LOC123160325 (tae) LOC123160531 (tae) LOC123166878 (tae) LOC123166970 (tae) LOC123167086 (tae) LOC123167432 (tae) LOC123168236 (tae) LOC123169320 (tae) LOC123171182 (tae) LOC123172934 (tae) LOC123178742 (tae) LOC123182957 (tae) LOC123183295 (tae) LOC123184816 (tae) LOC123184818 (tae) LOC123396132 (hvu) LOC123407824 (hvu) LOC123409363 (hvu) LOC123411150 (hvu) LOC123411227 (hvu) LOC123411684 (hvu) LOC123413019 (hvu) LOC123421037 (hvu) LOC123425140 (hvu) LOC123425397 (hvu) LOC123429002 (hvu) LOC123429003 (hvu) LOC123429523 (hvu)

Subcellular
localization
wolf

chlo 6, E.R. 1, nucl 1, extr 1, pero 1, E.R._vacu 1, E.R._plas 1, cyto_E.R. 1	(predict for NP_193815.2)
chlo 6, E.R. 2, extr 1, pero 1	(predict for NP_974580.1)

Subcellular
localization
TargetP

scret 5	(predict for NP_193815.2)
scret 5	(predict for NP_974580.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with AT4G20830 on the network
coex z^*	Locus	Function^*	CoexViewer	Entrez Gene ID^*
6.4	CRK11	cysteine-rich RLK (RECEPTOR-like protein kinase) 11	[detail]	828418
6.3	AT1G19020	CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase	[detail]	838483
5.8	AT4G24160	alpha/beta-Hydrolases superfamily protein	[detail]	828516
5.4	AT5G18470	Curculin-like (mannose-binding) lectin family protein	[detail]	831965

Coexpressed
gene list

[Coexpressed gene list for AT4G20830]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

254432_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

254432_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

254432_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	827831
Refseq ID (protein)	NP_193815.2
Refseq ID (protein)	NP_974580.1

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