[←][→] ath   AT5G11260 Gene
functional annotation
Function   Basic-leucine zipper (bZIP) transcription factor family protein  
GO BP
GO:0031539 [list] [network] positive regulation of anthocyanin metabolic process  (6 genes)  IMP  
GO:0042753 [list] [network] positive regulation of circadian rhythm  (12 genes)  IMP  
GO:0010099 [list] [network] regulation of photomorphogenesis  (34 genes)  IBA IMP  
GO:0009958 [list] [network] positive gravitropism  (36 genes)  IMP  
GO:0009585 [list] [network] red, far-red light phototransduction  (54 genes)  IEA  
GO:0010218 [list] [network] response to far red light  (54 genes)  IBA IEP  
GO:0009640 [list] [network] photomorphogenesis  (71 genes)  TAS  
GO:0009740 [list] [network] gibberellic acid mediated signaling pathway  (71 genes)  IMP  
GO:0010224 [list] [network] response to UV-B  (71 genes)  IEP IGI IMP  
GO:0010114 [list] [network] response to red light  (74 genes)  IBA IEP  
GO:0010017 [list] [network] red or far-red light signaling pathway  (76 genes)  IBA IMP  
GO:0009787 [list] [network] regulation of abscisic acid-activated signaling pathway  (110 genes)  IMP  
GO:0080167 [list] [network] response to karrikin  (128 genes)  IEP  
GO:0009738 [list] [network] abscisic acid-activated signaling pathway  (194 genes)  IEA  
GO:0009737 [list] [network] response to abscisic acid  (574 genes)  IMP  
GO:0006355 [list] [network] regulation of transcription, DNA-templated  (1984 genes)  IEA TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA IDA ISM  
GO MF
GO:0003690 [list] [network] double-stranded DNA binding  (343 genes)  IPI  
GO:0043565 [list] [network] sequence-specific DNA binding  (796 genes)  IBA  
GO:0044212 [list] [network] transcription regulatory region DNA binding  (871 genes)  IPI  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1599 genes)  ISS TAS  
GO:0003677 [list] [network] DNA binding  (2280 genes)  IDA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath04712 [list] [network] Circadian rhythm - plant (36 genes)
Protein NP_001330553.1  NP_568246.1 
BLAST NP_001330553.1  NP_568246.1 
Orthologous [Ortholog page] HY5 (sly)  STF2 (gma)  BZIP36 (gma)  BZIP69 (gma)  HYH (ath)  LOC4327123 (osa)  LOC4328662 (osa)  LOC7471583 (ppo)  LOC7477210 (ppo)  LOC9268301 (osa)  LOC11420561 (mtr)  LOC25490432 (mtr)  LOC100192956 (zma)  LOC100261472 (vvi)  LOC100286123 (zma)  LOC100383828 (zma)  LOC100783826 (gma)  LOC102663507 (gma)  LOC103634871 (zma)  LOC103638645 (zma)  LOC103839184 (bra)  HY5 (bra)  LOC103850763 (bra)  LOC103859717 (bra)  LOC103869673 (bra)  LOC104879018 (vvi)  LOC109940495 (zma)  LOC109944294 (zma) 
Subcellular
localization
wolf
nucl 9,  cyto_nucl 5  (predict for NP_001330553.1)
nucl 9,  cyto_nucl 5  (predict for NP_568246.1)
Subcellular
localization
TargetP
chlo 8  (predict for NP_001330553.1)
chlo 8  (predict for NP_568246.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 2
ath04712 Circadian rhythm - plant 2
ath04120 Ubiquitin mediated proteolysis 2
Genes directly connected with HY5 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.4 ABCI20 non-intrinsic ABC protein 9 [detail] 831709
8.6 DDB2 damaged DNA binding 2 [detail] 835990
8.3 HYH HY5-homolog [detail] 821027
5.9 AT2G41000 Chaperone DnaJ-domain superfamily protein [detail] 818700
5.5 CXE5 carboxyesterase 5 [detail] 841390
5.5 RHA2A RING-H2 finger A2A [detail] 838073
5.1 AT2G43340 hypothetical protein (DUF1685) [detail] 818935
4.8 MYB13 myb domain protein 13 [detail] 837127
4.8 AT1G13670 hypothetical protein [detail] 837928
4.1 PSS1 phosphatidyl serine synthase family protein [detail] 838074
Coexpressed
gene list		 [Coexpressed gene list for HY5]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250420_at
250420_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250420_at
250420_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
250420_at
250420_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 830996      
Refseq ID (protein) NP_001330553.1 
NP_568246.1 


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