[←][→] ath   AT5G12200 Gene
functional annotation
Function   pyrimidine 2  
GO BP
GO:0006208 [list] [network] pyrimidine nucleobase catabolic process  (3 genes)  IBA  
GO:0006212 [list] [network] uracil catabolic process  (3 genes)  IMP  
GO:0019483 [list] [network] beta-alanine biosynthetic process  (3 genes)  IEA  
GO:0043562 [list] [network] cellular response to nitrogen levels  (44 genes)  IEP  
GO CC
GO:0005783 [list] [network] endoplasmic reticulum  (877 genes)  IDA  
GO:0005794 [list] [network] Golgi apparatus  (1430 genes)  IDA  
GO:0012505 [list] [network] endomembrane system  (2531 genes)  IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  IBA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  ISM  
GO:0009536 [list] [network] plastid  (5519 genes)  HDA  
GO MF
GO:0004157 [list] [network] dihydropyrimidinase activity  (1 genes)  IBA IGI  
GO:0016812 [list] [network] hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides  (6 genes)  IBA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
KEGG ath00240 [list] [network] Pyrimidine metabolism (57 genes)
ath00410 [list] [network] beta-Alanine metabolism (47 genes)
ath00770 [list] [network] Pantothenate and CoA biosynthesis (28 genes)
Protein NP_568258.2 
BLAST NP_568258.2 
Orthologous [Ortholog page] LOC4327558 (osa)  LOC7454881 (ppo)  LOC7480110 (ppo)  LOC11421464 (mtr)  LOC11434280 (mtr)  LOC100249986 (vvi)  LOC100272767 (zma)  LOC100797867 (gma)  LOC100802353 (gma)  LOC101261880 (sly)  LOC103846659 (bra) 
Subcellular
localization
wolf
plas 2,  E.R. 2,  E.R._plas 2,  chlo 1,  cyto 1,  cysk 1,  nucl_plas 1  (predict for NP_568258.2)
Subcellular
localization
TargetP
scret 9,  chlo 3  (predict for NP_568258.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00240 Pyrimidine metabolism 3
ath00410 beta-Alanine metabolism 3
ath00770 Pantothenate and CoA biosynthesis 3
ath00480 Glutathione metabolism 2
ath00590 Arachidonic acid metabolism 2
Genes directly connected with PYD2 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.6 AT3G09470 Major facilitator superfamily protein [detail] 820104
7.2 BETA-UP beta-ureidopropionase [detail] 836558
6.8 GPX3 glutathione peroxidase 3 [detail] 818936
6.6 AT2G33630 NAD(P)-binding Rossmann-fold superfamily protein [detail] 817929
5.2 AT3G45310 Cysteine proteinases superfamily protein [detail] 823669
5.1 AT2G22660 DNA-binding protein, putative (duplicated DUF1399) [detail] 816797
Coexpressed
gene list		 [Coexpressed gene list for PYD2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250318_at
250318_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250318_at
250318_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
250318_at
250318_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 831093      
Refseq ID (protein) NP_568258.2 


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