[←][→] ath   AT5G15110 Gene
functional annotation
Function   Pectate lyase family protein  
GO BP
GO:0045490 [list] [network] pectin catabolic process  (96 genes)  IEA  
GO CC
GO:0005576 [list] [network] extracellular region  (3363 genes)  ISM  
GO MF
GO:0030570 [list] [network] pectate lyase activity  (24 genes)  IEA  
GO:0016829 [list] [network] lyase activity  (412 genes)  ISS  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
KEGG ath00040 [list] [network] Pentose and glucuronate interconversions (96 genes)
Protein NP_197015.4 
BLAST NP_197015.4 
Orthologous [Ortholog page] LOC542245 (zma)  AT2G02720 (ath)  AT3G01270 (ath)  AT59 (ath)  LOC4328714 (osa)  LOC4340099 (osa)  LOC4340103 (osa)  LOC4340105 (osa)  LOC4341389 (osa)  LOC7457856 (ppo)  LOC7472610 (ppo)  LOC7495953 (ppo)  LOC11406962 (mtr)  LOC11416043 (mtr)  LOC11438708 (mtr)  LOC25495277 (mtr)  LOC25502784 (mtr)  LOC100254377 (vvi)  LOC100257069 (vvi)  LOC100262177 (vvi)  LOC100267345 (vvi)  LOC100284055 (zma)  LOC100284356 (zma)  LOC100780236 (gma)  LOC100785801 (gma)  LOC100796307 (gma)  LOC100798579 (gma)  LOC100801864 (gma)  LOC100810615 (gma)  LOC100810857 (gma)  LOC101246909 (sly)  LOC101249735 (sly)  LOC101250914 (sly)  LAT59 (sly)  LOC101260096 (sly)  LOC101264694 (sly)  LOC103827511 (bra)  LOC103836073 (bra)  LOC103839439 (bra)  LOC103842969 (bra)  LOC103846441 (bra)  LOC103850082 (bra)  LOC103850968 (bra)  LOC103853982 (bra)  LOC103856110 (bra)  LOC103858923 (bra)  LOC103872235 (bra)  LOC107275230 (zma) 
Subcellular
localization
wolf
cyto 4,  cyto_nucl 3,  mito 1,  plas 1,  vacu 1,  mito_plas 1  (predict for NP_197015.4)
Subcellular
localization
TargetP
scret 9  (predict for NP_197015.4)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT5G15110 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
19.6 RALFL15 RALF-like 15 [detail] 28718292
18.7 AT5G28690 carboxylate clamp-TPR protein (DUF1685) [detail] 832976
18.7 AT1G11765 Plant self-incompatibility protein S1 family [detail] 837721
17.7 AT5G60615 Defensin-like (DEFL) family protein [detail] 3771542
13.1 AT5G50830 nuclear polyadenylated RNA-binding protein [detail] 835155
10.0 AT2G26490 Transducin/WD40 repeat-like superfamily protein [detail] 817190
5.1 AT5G64790 O-Glycosyl hydrolases family 17 protein [detail] 836600
Coexpressed
gene list		 [Coexpressed gene list for AT5G15110]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
246545_at
246545_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
246545_at
246545_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
246545_at
246545_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 831363      
Refseq ID (protein) NP_197015.4 


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