CoexViewer

Coexpression detail for AT3G56580 and SEC15A
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath AT3G56580 RING/U-box superfamily protein 824825 At3g56580 0.7 5.56 5.38 4.24 160.50 1.77 2.06 1.63 3.82 -0.58 1.03
ath SEC15A exocyst complex component sec15A 824831 At3g56640 0.7
Platform:

coex z = 5.381



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 824825
(z-scored expression)		 824831
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
39.7 -6.2 -6.4 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
27.1 -5.1 -5.3 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
20.2 -4.6 -4.4 SRP104760 SRR5467210 Interactions between effector-triggered immunity (ETI) and pattern-triggered immunity (PTI) in an Arabidopsis dde2 ein2 pad4 sid2 mutant
19.2 4.6 4.2 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
18.9 -4.6 -4.1 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
17.8 -6.2 -2.9 SRP267137 SRR12005730 ConnecTF: A platform to integrate validated transcription factor-target interactions to build and refine gene regulatory networks
17.6 -4.2 -4.2 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
15.0 -4.3 -3.5 SRP297585 SRR13239294 mRNA profiling of Trihelix transcription factor ASIL mutants at the late heart stage embryos
14.8 -3.6 -4.1 SRP150217 SRR7289571 Widespread inter-individual gene expression variability in Arabidopsis thaliana
14.3 -3.8 -3.8 SRP274404 SRR12356829 Exchange of molecular and cellular information: a hybrid model that integrates stem cell divisions and key regulatory interactions [w5C6]
14.3 -3.0 -4.7 SRP114806 SRR5894632 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
14.0 -3.9 -3.6 SRP119072 SRR6113964 Nucleo-cytoplasmic partitioning of ARF proteins controls auxin responses in Arabidopsis thaliana
13.6 -3.9 -3.5 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
13.2 -3.8 -3.4 SRP150217 SRR7289599 Widespread inter-individual gene expression variability in Arabidopsis thaliana
13.2 -3.5 -3.8 SRP253504 SRR11359544 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
12.9 -3.3 -3.9 SRP095347 SRR5120336 Genetic influences on gene expression in Arabidopsis thaliana
12.6 -2.8 -4.5 ERP123539 ERR4471734 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
12.6 -2.8 -4.5 ERP123539 ERR4471737 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
12.6 -2.8 -4.5 ERP123539 ERR4471735 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
12.6 -2.8 -4.5 ERP123539 ERR4471736 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
12.2 -2.1 -5.8 SRP285380 SRR12712251 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
12.2 3.5 3.5 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
12.1 -4.3 -2.8 SRP285380 SRR12712238 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
12.0 -3.5 -3.4 SRP150217 SRR7289601 Widespread inter-individual gene expression variability in Arabidopsis thaliana
12.0 3.5 3.4 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
11.8 -4.1 -2.9 ERP116123 ERR3414697 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
11.8 -3.0 -4.0 SRP101274 SRR5308642 During development, the Sku5 mutant roots engage different genes than wild type WS roots, either on the ground or in spaceflight.
11.6 3.6 3.2 SRP277946 SRR12470188 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.6 -3.4 -3.4 SRP039091 SRR1179986 Transcriptomes for hybrids (F1s) between 18 Arabidopsis thaliana parents of the Multiparent Advanced Generation Inter-Cross (MAGIC) genetic mapping resource
11.5 -3.3 -3.4 SRP073724 SRR3419765 Study of primary transcriptional changes induced by EDS1/PAD4 in Arabidopsis using an estradiol-inducible system
11.4 -3.7 -3.0 ERP106238 ERR2245583 PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis
11.4 3.3 3.4 SRP266133 SRR11934683 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
11.3 -3.4 -3.4 SRP251246 SRR11213957 Role of MPK4 in pathogen-associated molecular pattern-triggered alternative splicing in Arabidopsis
11.2 -3.4 -3.3 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
11.2 -2.0 -5.5 SRP100712 SRR5285649 Plant development on ISS differes from the development on the ground and is influenced by the genetic background.
11.2 -4.7 -2.4 SRP339340 SRR16119311 Single seeds exhibit transcriptional heterogeneity during secondary dormancy induction
11.2 3.4 3.3 SRP277946 SRR12470193 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.8 -3.3 -3.3 SRP150217 SRR7289615 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.7 3.3 3.2 SRP277946 SRR12470191 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.6 -3.4 -3.2 SRP269252 SRR12110257 Maternally expressed imprinted gene SDC modulates circadian period and hypocotyl length
10.6 3.1 3.4 SRP254177 SRR11429303 Time course of brassinolide treatment on Arabidopsis seedlings
10.5 3.5 3.0 SRP277946 SRR12470194 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.5 -2.4 -4.3 ERP118109 ERR3624434 Dark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
10.4 -3.1 -3.4 SRP137763 SRR6950045 The SOG1 transcriptional activator and the MYB3R family of repressors control a complex gene network in response to DNA damage in Arabidopsis [RNA-seq t vs t0]
10.2 -3.1 -3.3 SRP119072 SRR6113965 Nucleo-cytoplasmic partitioning of ARF proteins controls auxin responses in Arabidopsis thaliana
10.2 -3.4 -3.0 SRP251507 SRR11235143 Transcriptome and translatome profiling of Arabidopsis upf1-3 pad4 mutant
10.1 -3.2 -3.2 SRP101641 SRR5330614 Chloroplast signalling gates thermotolerance in Arabidopsis
10.1 3.3 3.1 SRP029957 SRR988015 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
10.1 -3.0 -3.3 SRP315390 SRR14275191 The E3 Ubiquitin Ligase AFF1 targets ARF19 to the proteasome
10.1 3.7 2.7 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
Note: Samples whose contribution is more than 10 are outputted.



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