[←][→] ath   At3g56580 Gene
functional annotation
Function   RING/U-box superfamily protein      
GO BP
GO:1902006 [list] [network] negative regulation of proline biosynthetic process  (1 genes)  IMP  
GO:0030104 [list] [network] water homeostasis  (15 genes)  IMP  
GO:2000070 [list] [network] regulation of response to water deprivation  (40 genes)  IMP  
GO:0047484 [list] [network] regulation of response to osmotic stress  (47 genes)  IMP  
GO:0006970 [list] [network] response to osmotic stress  (883 genes)  IEP  
GO:0009414 [list] [network] response to water deprivation  (1006 genes)  IEP  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (78 genes)  IEA  
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (261 genes)  IDA  
KEGG
Protein NP_001030874.1  NP_567039.1  NP_974448.1 
BLAST NP_001030874.1  NP_567039.1  NP_974448.1 
Orthologous [Ortholog page] RHC1A (ath)  LOC4332849 (osa)  LOC7458900 (ppo)  LOC7495674 (ppo)  LOC11431832 (mtr)  LOC25480121 (mtr)  LOC25483287 (mtr)  LOC100787242 (gma)  LOC100787523 (gma)  LOC100813674 (gma)  LOC100819514 (gma)  LOC101254413 (sly)  LOC103841559 (bra)  LOC103857956 (bra)  LOC103866521 (bra)  LOC123063184 (tae)  LOC123072085 (tae)  LOC123080373 (tae)  LOC123440732 (hvu) 
Subcellular
localization
wolf
nucl 8,  cyto_nucl 4,  chlo 1,  mito 1,  chlo_mito 1  (predict for NP_001030874.1)
nucl 8,  cyto_nucl 4,  chlo 1,  mito 1,  chlo_mito 1  (predict for NP_567039.1)
nucl 8,  cyto_nucl 4,  chlo 1,  mito 1,  chlo_mito 1  (predict for NP_974448.1)
Subcellular
localization
TargetP
mito 8  (predict for NP_001030874.1)
mito 8  (predict for NP_567039.1)
mito 8  (predict for NP_974448.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00061 Fatty acid biosynthesis 2
ath00010 Glycolysis / Gluconeogenesis 2
ath00260 Glycine, serine and threonine metabolism 2
ath01200 Carbon metabolism 2
Genes directly connected with AT3G56580 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
5.6 SEC15A exocyst complex component sec15A [detail] 824831
5.4 FaTA fatA acyl-ACP thioesterase [detail] 822102
5.4 AT1G47740 PPPDE putative thiol peptidase family protein [detail] 841185
Coexpressed
gene list		 [Coexpressed gene list for AT3G56580]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251708_at
251708_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251708_at
251708_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251708_at
251708_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824825      
Refseq ID (protein) NP_001030874.1 
NP_567039.1 
NP_974448.1 


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