CoexViewer

Coexpression detail for AT5G04960 and CCP3
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath AT5G04960 Plant invertase/pectin methylesterase inhibitor superfamily 830378 At5g04960 0.06 8.25 4.77 9.50 50.30 2.88 3.28 3.37 -0.03 1.68 3.59
ath CCP3 Serine protease inhibitor (SERPIN) family protein 817062 At2g25240 0.06
Platform:

coex z = 4.7658



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 830378
(z-scored expression)		 817062
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
33.5 -10.5 -3.2 SRP277946 SRR12469767 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
24.3 -4.9 -5.0 SRP114806 SRR5894583 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
21.8 5.3 4.1 SRP095347 SRR5120317 Genetic influences on gene expression in Arabidopsis thaliana
21.2 -6.6 -3.2 SRP277946 SRR12469639 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
19.4 4.9 4.0 SRP093765 SRR5045295 Transcriptome analysis after IAA paste application on pin1 mutant inflorescence meristems
17.9 -4.7 -3.8 SRP323348 SRR14766017 Differentially expressed transcriptomes of NADases mutant in Arabidopsis
17.7 -5.5 -3.2 SRP277946 SRR12469640 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
17.3 -3.5 -5.0 SRP114806 SRR5894593 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
17.3 4.7 3.7 SRP306749 SRR13724781 The role of ATXR6 expression in modulating genome stability and transposable element repression in Arabidopsis [RNA-seq_11]
15.8 5.8 2.7 SRP097877 SRR5205698 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
14.5 -3.6 -4.1 SRP101641 SRR5330627 Chloroplast signalling gates thermotolerance in Arabidopsis
14.5 3.9 3.7 SRP277946 SRR12470180 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
13.8 4.5 3.1 SRP325022 SRR14877257 Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells
13.4 4.2 3.2 SRP282437 SRR12642102 Complementary capability of cell division and photosynthesis triggers growth vigor in Arabidopsis hybrids
13.3 4.2 3.2 SRP282437 SRR12642100 Complementary capability of cell division and photosynthesis triggers growth vigor in Arabidopsis hybrids
13.3 5.3 2.5 SRP112501 SRR5831044 Combining chemical and genetic approaches to increase drought resistance in plants
13.1 -3.9 -3.4 SRP187156 SRR8648403 Genome-wide profiling of Arabidopsis thaliana Col-0 and ein2/jar1 host responses to Macrophomina phaseolina infection
13.1 -2.2 -6.1 SRP187062 SRR8645803 Expression of a dominant-negative AtNEET-H89C protein disrupts iron–sulfur metabolism and iron homeostasis in Arabidopsis
13.1 -3.8 -3.5 SRP279325 SRR12546072 Coordination of microbe-host homeostasis via a crosstalk with plant innate immunity
12.6 4.6 2.7 SRP097877 SRR5205644 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
11.8 -3.7 -3.2 SRP277946 SRR12469859 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.7 -3.5 -3.3 SRP044746 SRR3046819 Cryptochromes interact directly with PIFs to control plant growth in limiting blue light
11.7 -2.3 -5.0 SRP114806 SRR5894672 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
11.6 3.9 3.0 SRP282437 SRR12642101 Complementary capability of cell division and photosynthesis triggers growth vigor in Arabidopsis hybrids
11.5 -3.5 -3.3 SRP255966 SRR11523471 Whole genome RNA-sequencing from roots of Arabidopsis thaliana wild-type and stop1 exposed to low pH, low phosphate (Pi), Aluminum and Iron excess conditions.
11.5 5.3 2.2 SRP346154 SRR16948992 Plants grow in lunar regolith
11.4 4.8 2.4 SRP306740 SRR13724702 The role of ATXR6 expression in modulating genome stability and transposable element repression in Arabidopsis [RNA-seq_16]
11.1 -3.4 -3.3 SRP161785 SRR7830354 Arabidopsis seedling hydroponic treatment with Streptomyces AGN23 culture supernatants
10.9 -4.6 -2.4 SRP150217 SRR7289601 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.9 -3.9 -2.8 SRP118384 SRR6055481 CPL4 is a suppressor of de novo shoot organogenesis from roots of Arabidopsis thaliana
10.9 -3.4 -3.2 SRP277946 SRR12469957 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.8 -3.5 -3.1 SRP073711 SRR3418027 RNA-seq of abscisic acid-reponsive transcription factors
10.8 -3.8 -2.8 SRP308553 SRR13805909 The lncRNA APOLO and the methylcytosine-binding protein VIM1 are thermomorphogenesis regulators
10.8 -3.3 -3.3 SRP169564 SRR8206395 Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression
10.6 -2.8 -3.8 SRP187455 SRR8666072 Transcriptome analysis using RNA sequencing conducted for wild type (Col-0) and a stable transgenic line with ectopic expression of AT3G11290 (35S:HIN1) under control conditions and after 96 hours at moderate low water potential stress (-0.7 MPa)
10.2 3.9 2.6 SRP125388 SRR6312347 Transcriptome dynamics at Arabidopsis graft junctions reveal an intertissue recognition mechanism that activates vascular regeneration
10.1 -4.3 -2.4 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
10.0 6.0 1.7 SRP326522 SRR15015712 Cell-wall damage activates DOF transcription factors to promote wound healing and tissue regeneration in Arabidopsis thaliana
10.0 3.2 3.1 SRP093972 SRR5057797 Transcriptome analysis after ectopically expressing REV in SAM epidermis
10.0 -3.9 -2.6 SRP135665 SRR6833099 Arabidopsis SE coordinates histone methyltransferases ATXR5/6 and RNA processing factor RDR6 to regulate transposon expression [RNA-Seq]
Note: Samples whose contribution is more than 10 are outputted.



The preparation time of this page was 0.7 [sec].