[←][→] ath   At5g04960 Gene
functional annotation
Function   Plant invertase/pectin methylesterase inhibitor superfamily      
GO BP
GO:1902066 [list] [network] regulation of cell wall pectin metabolic process  (5 genes)  IMP  
GO:0045490 [list] [network] pectin catabolic process  (78 genes)  IEA  
GO:0042545 [list] [network] cell wall modification  (160 genes)  IEA  
GO CC
GO:0005739 [list] [network] mitochondrion  (4228 genes)  ISM  
GO MF
GO:0046910 [list] [network] pectinesterase inhibitor activity  (16 genes)  IMP  
KEGG
Protein NP_196115.1 
BLAST NP_196115.1 
Orthologous [Ortholog page] RHS12 (ath)  LOC7469497 (ppo)  LOC7486855 (ppo)  LOC11419442 (mtr)  LOC25501130 (mtr)  LOC100808802 (gma)  LOC100811152 (gma)  LOC100816529 (gma)  LOC101248642 (sly)  LOC101260091 (sly)  LOC103847358 (bra)  LOC103859360 (bra)  LOC108871269 (bra) 
Subcellular
localization
wolf
plas 8,  cyto_plas 4,  E.R. 1  (predict for NP_196115.1)
Subcellular
localization
TargetP
other 7,  mito 3  (predict for NP_196115.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00940 Phenylpropanoid biosynthesis 4
Genes directly connected with AT5G04960 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
17.8 RHS13 root hair specific 13 [detail] 828083
17.0 XTH12 xyloglucan endotransglucosylase/hydrolase 12 [detail] 835857
16.8 RHS19 root hair specific 19 [detail] 836876
16.3 RHS12 root hair specific 12 [detail] 820240
16.3 XTH14 xyloglucan endotransglucosylase/hydrolase 14 [detail] 828687
15.9 AT3G49960 Peroxidase superfamily protein [detail] 824158
14.9 PRP3 proline-rich protein 3 [detail] 825442
13.7 AGP3 arabinogalactan protein 3 [detail] 830172
13.2 AT4G25790 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein [detail] 828684
12.9 MRH6 Adenine nucleotide alpha hydrolases-like superfamily protein [detail] 814899
9.8 RHS14 root hair specific 14 [detail] 828297
9.0 HA7 H[+]-ATPase 7 [detail] 825204
Coexpressed
gene list		 [Coexpressed gene list for AT5G04960]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250801_at
250801_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250801_at
250801_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
250801_at
250801_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 830378      
Refseq ID (protein) NP_196115.1 


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