CoexViewer

Coexpression detail for AT5G04960 and AT4G25790
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath AT5G04960 Plant invertase/pectin methylesterase inhibitor superfamily 830378 At5g04960 0.06 13.22 6.38 16.48 12.40 4.48 3.75 3.85 4.40 4.56 3.29
ath AT4G25790 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein 828684 At4g25790 0.06
Platform:

coex z = 6.3787



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 830378
(z-scored expression)		 828684
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
29.2 -10.5 -2.8 SRP277946 SRR12469767 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
27.8 9.8 2.8 ERP116123 ERR3414763 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
21.6 7.6 2.8 ERP116123 ERR3414764 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
20.9 5.6 3.8 SRP091641 SRR4426967 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
20.3 -4.9 -4.2 SRP114806 SRR5894585 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
18.5 -6.6 -2.8 SRP277946 SRR12469639 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
17.8 5.0 3.6 SRP136269 SRR6880728 Cold priming and triggering of Arabidopsis accessions
17.5 -3.2 -5.5 SRP277946 SRR12469958 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
17.2 5.3 3.2 SRP112501 SRR5831044 Combining chemical and genetic approaches to increase drought resistance in plants
17.0 -2.9 -5.9 SRP150217 SRR7289599 Widespread inter-individual gene expression variability in Arabidopsis thaliana
16.6 4.2 3.9 SRP282437 SRR12642100 Complementary capability of cell division and photosynthesis triggers growth vigor in Arabidopsis hybrids
15.9 7.2 2.2 SRP091641 SRR4426725 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
15.4 -5.5 -2.8 SRP277946 SRR12469640 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
15.4 4.2 3.7 SRP282437 SRR12642102 Complementary capability of cell division and photosynthesis triggers growth vigor in Arabidopsis hybrids
14.5 -2.6 -5.5 SRP277946 SRR12469871 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
14.4 -3.5 -4.2 SRP114806 SRR5894633 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
13.9 -3.9 -3.6 SRP187156 SRR8648403 Genome-wide profiling of Arabidopsis thaliana Col-0 and ein2/jar1 host responses to Macrophomina phaseolina infection
13.7 -2.5 -5.5 SRP277946 SRR12470094 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
13.7 -2.5 -5.5 SRP277946 SRR12470099 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
13.6 3.9 3.5 SRP282437 SRR12642101 Complementary capability of cell division and photosynthesis triggers growth vigor in Arabidopsis hybrids
13.2 -3.8 -3.5 SRP308553 SRR13805909 The lncRNA APOLO and the methylcytosine-binding protein VIM1 are thermomorphogenesis regulators
13.1 2.8 4.6 SRP271641 SRR12211735 Arabidopsis thaliana ecotypes Rodasen-47 (Sweden) and Castelnuovo-12 (Italy) grown in high light and/or cold
12.9 -2.3 -5.5 SRP277946 SRR12470095 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.8 -4.7 -2.7 SRP323348 SRR14766017 Differentially expressed transcriptomes of NADases mutant in Arabidopsis
12.5 3.2 3.9 SRP297585 SRR13239290 mRNA profiling of Trihelix transcription factor ASIL mutants at the late heart stage embryos
12.4 -3.8 -3.3 SRP279325 SRR12546072 Coordination of microbe-host homeostasis via a crosstalk with plant innate immunity
12.3 5.6 2.2 SRP091641 SRR4426719 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
12.3 5.6 2.2 SRP091641 SRR4426735 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
12.2 -3.5 -3.4 SRP044746 SRR3046819 Cryptochromes interact directly with PIFs to control plant growth in limiting blue light
12.1 -3.6 -3.4 SRP234996 SRR10603594 Naked1 targets Topless to up-regulate Auxin signaling and suppress immunity
11.6 5.6 2.1 SRP122518 SRR6230503 Potential role of the CBF Pathway contributing to local adaptation of ecotypes collected from Italy and Sweden
11.4 -3.5 -3.3 SRP277943 SRR12469293 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of a community of commensal bacteria [RST]
11.4 -3.0 -3.8 SRP101641 SRR5330634 Chloroplast signalling gates thermotolerance in Arabidopsis
11.3 4.6 2.4 SRP097877 SRR5205703 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
11.2 -3.3 -3.4 SRP234996 SRR10603595 Naked1 targets Topless to up-regulate Auxin signaling and suppress immunity
10.6 -3.6 -2.9 SRP050945 SRR1696859 Gibberellin and Strigolactone signaling interplay in Arabidopsis thaliana
10.6 -2.5 -4.2 SRP114806 SRR5894634 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
10.5 4.1 2.6 ERP115370 ERR3333408 Arabidopsis tissue atlas
10.4 -1.9 -5.5 SRP277946 SRR12469830 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.3 4.4 2.3 SRP051764 SRR1744391 Hybrid Mimics and Hybrid Vigor in Arabidopsis (F6 data)
10.3 -3.7 -2.8 SRP277946 SRR12469859 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.3 -3.4 -3.0 SRP161785 SRR7830354 Arabidopsis seedling hydroponic treatment with Streptomyces AGN23 culture supernatants
10.2 3.9 2.6 SRP277946 SRR12470180 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.2 -4.9 -2.1 SRP114806 SRR5894583 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
10.1 4.0 2.5 SRP049951 SRR1654359 Transcriptional response to zebularine and mitomycin C (MMC) in wild type and ATR deficient Arabidopsis thaliana plants
10.0 -3.6 -2.8 SRP083970 SRR4115313 The Cytoplasmic mRNA Decay Landscape of Arabidopsis Seedlings [RNA-seq]
Note: Samples whose contribution is more than 10 are outputted.



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