CoexViewer

Coexpression detail for AT5G04960 and AT5G17820
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath AT5G04960 Plant invertase/pectin methylesterase inhibitor superfamily 830378 At5g04960 0.06 8.56 5.21 9.59 14.70 3.38 4.63 4.03 0.45 4.31 8.47
ath AT5G17820 Peroxidase superfamily protein 831650 At5g17820 0.06
Platform:

coex z = 5.2147



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 830378
(z-scored expression)		 831650
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
105.4 -10.5 -10.1 SRP277946 SRR12469767 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
59.1 5.6 10.6 SRP091641 SRR4426967 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
54.8 -6.6 -8.3 SRP277946 SRR12469639 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
50.5 -5.5 -9.2 SRP277946 SRR12469640 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
47.4 5.6 8.5 SRP091641 SRR4426719 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
33.7 8.2 4.1 SRP154321 SRR7535942 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [Timecourse]
33.7 8.2 4.1 SRP154321 SRR7535944 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [Timecourse]
25.5 5.6 4.6 SRP091641 SRR4426974 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
25.5 5.6 4.6 SRP091641 SRR4426973 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
25.0 -4.9 -5.1 SRP114806 SRR5894583 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
24.6 5.3 4.6 SRP112501 SRR5831044 Combining chemical and genetic approaches to increase drought resistance in plants
21.7 -4.6 -4.7 SRP150217 SRR7289601 Widespread inter-individual gene expression variability in Arabidopsis thaliana
17.5 5.6 3.1 SRP162520 SRR7899132 Transcriptome-wide analysis of gene expression using detached first-pair rosette leaves before culture (time 0), at 10min to 12h after detachment Col-0, coi1-2 and sdg8-2 seedlings.
17.1 -3.2 -5.4 SRP277946 SRR12469643 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
16.4 5.0 3.3 SRP136269 SRR6880728 Cold priming and triggering of Arabidopsis accessions
16.1 4.1 3.9 SRP199288 SRR9113092 In Arabidopsis hybrids and Hybrid Mimics up-regulation of cell wall biogenesis is associated with increased plant size
15.8 -4.7 -3.4 SRP323348 SRR14766017 Differentially expressed transcriptomes of NADases mutant in Arabidopsis
15.2 3.9 3.9 SRP277946 SRR12470180 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
14.8 -4.9 -3.1 SRP114806 SRR5894585 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
14.1 4.4 3.2 SRP302122 SRR13450914 The CLASSY family controls tissue-specific DNA methylation patterns in Arabidopsis [RNA-seq]
14.0 -4.3 -3.3 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
13.9 -3.8 -3.6 SRP308553 SRR13805909 The lncRNA APOLO and the methylcytosine-binding protein VIM1 are thermomorphogenesis regulators
13.8 4.1 3.4 ERP115370 ERR3333408 Arabidopsis tissue atlas
13.7 -3.5 -3.9 SRP114806 SRR5894633 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
13.2 4.5 2.9 SRP325022 SRR14877257 Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells
13.1 5.3 2.5 SRP346154 SRR16948992 Plants grow in lunar regolith
13.0 4.2 3.1 SRP282437 SRR12642100 Complementary capability of cell division and photosynthesis triggers growth vigor in Arabidopsis hybrids
12.8 4.2 3.1 SRP282437 SRR12642102 Complementary capability of cell division and photosynthesis triggers growth vigor in Arabidopsis hybrids
12.5 4.5 2.8 SRP306748 SRR13724776 The role of ATXR6 expression in modulating genome stability and transposable element repression in Arabidopsis [RNA-seq_9_12]
12.4 4.7 2.7 SRP306749 SRR13724781 The role of ATXR6 expression in modulating genome stability and transposable element repression in Arabidopsis [RNA-seq_11]
12.2 4.5 2.7 SRP173235 SRR8310105 Mediator12 and 13 act as conditional anti-silencing factors in Arabidopsis [RNA-seq]
12.1 -3.8 -3.2 SRP163134 SRR7954868 Transcriptional charecterization of the eds4 mutant transcriptome
11.9 4.4 2.7 SRP073485 SRR3401818 Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation
11.9 -3.0 -3.9 SRP105064 SRR5469583 High-resolution gene expression datasets of ontogenetic zones in the root apical meristem
11.8 -3.9 -3.0 SRP187156 SRR8648403 Genome-wide profiling of Arabidopsis thaliana Col-0 and ein2/jar1 host responses to Macrophomina phaseolina infection
11.7 4.8 2.4 SRP306740 SRR13724702 The role of ATXR6 expression in modulating genome stability and transposable element repression in Arabidopsis [RNA-seq_16]
11.5 5.6 2.1 SRP122518 SRR6230503 Potential role of the CBF Pathway contributing to local adaptation of ecotypes collected from Italy and Sweden
11.3 5.8 2.0 SRP097877 SRR5205698 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
11.2 3.9 2.9 SRP282437 SRR12642101 Complementary capability of cell division and photosynthesis triggers growth vigor in Arabidopsis hybrids
11.2 3.9 2.9 SRP125388 SRR6312347 Transcriptome dynamics at Arabidopsis graft junctions reveal an intertissue recognition mechanism that activates vascular regeneration
11.1 3.7 3.0 ERP115370 ERR3333409 Arabidopsis tissue atlas
11.1 -3.5 -3.1 SRP044746 SRR3046819 Cryptochromes interact directly with PIFs to control plant growth in limiting blue light
11.0 3.7 3.0 ERP115370 ERR3333396 Arabidopsis tissue atlas
10.8 -3.4 -3.2 SRP150217 SRR7289571 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.7 -3.4 -3.2 ERP108714 ERR2576892 Transcriptome analysis of khd-1, spen-1 and hub1-4 Arabidopsis mutants
10.3 4.4 2.3 SRP051764 SRR1744391 Hybrid Mimics and Hybrid Vigor in Arabidopsis (F6 data)
10.3 -3.6 -2.9 SRP101641 SRR5330627 Chloroplast signalling gates thermotolerance in Arabidopsis
10.3 -3.1 -3.3 SRP323348 SRR14766024 Differentially expressed transcriptomes of NADases mutant in Arabidopsis
10.3 -3.4 -3.0 SRP063017 SRR2221852 RNA-seq analysis of Arabidopsis thaliana wild-type roots and type-A arr3,4,5,6,7,8,9,15 mutant roots non-infected and infected with Heterodera schachtii nematodes
10.2 -3.6 -2.8 SRP234996 SRR10603594 Naked1 targets Topless to up-regulate Auxin signaling and suppress immunity
10.1 3.8 2.7 SRP125388 SRR6312358 Transcriptome dynamics at Arabidopsis graft junctions reveal an intertissue recognition mechanism that activates vascular regeneration
10.1 3.7 2.7 SRP125388 SRR6312348 Transcriptome dynamics at Arabidopsis graft junctions reveal an intertissue recognition mechanism that activates vascular regeneration
10.1 4.1 2.5 SRP361760 SRR18163181 The Dynamic Proteome in Arabidopsis Thaliana Early Embryogenesis
10.1 2.6 3.9 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.1 3.3 3.0 SRP063471 SRR2302911 ABA is required for plant acclimation to a combination of salt and heat stress
10.1 -4.3 -2.4 SRP017386 SRR627682 Transcriptome-wide analysis of gene expression in dark-grown WT and pif mutant seedlings
10.0 3.3 3.0 SRP100938 SRR5304378 During development, the Sku6 mutant roots engage different genes than wild type Col-0 roots, either on the ground or in spaceflight.
10.0 2.7 3.8 SRP222258 SRR15122078 A Genome-Scale TF-DNA Interaction Network for Transcriptional Regulation of Arabidopsis Primary and Specialized Metabolism
Note: Samples whose contribution is more than 10 are outputted.



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