CoexViewer

Coexpression detail for AT5G04960 and AT1G24620
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath AT5G04960 Plant invertase/pectin methylesterase inhibitor superfamily 830378 At5g04960 0.06 2.68 1.74 2.90 88.20 0.46 3.72 0.85 3.81 1.79 5.08
ath AT1G24620 EF hand calcium-binding protein family 839076 At1g24620 0.06
Platform:

coex z = 1.7395



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 830378
(z-scored expression)		 839076
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
50.5 8.2 6.2 SRP154321 SRR7535944 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [Timecourse]
30.5 -10.5 -2.9 SRP277946 SRR12469767 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
19.3 -6.6 -2.9 SRP277946 SRR12469639 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
17.5 -3.1 -5.6 SRP323348 SRR14766024 Differentially expressed transcriptomes of NADases mutant in Arabidopsis
16.2 4.8 3.4 SRP306740 SRR13724702 The role of ATXR6 expression in modulating genome stability and transposable element repression in Arabidopsis [RNA-seq_16]
16.1 -5.5 -2.9 SRP277946 SRR12469640 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
15.4 -4.0 -3.9 SRP114806 SRR5894610 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
14.4 4.4 3.3 SRP018034 SRR2079798 Time-course transcriptome of wild-type Arabidopsis leaf
14.2 -3.4 -4.2 SRP161785 SRR7830354 Arabidopsis seedling hydroponic treatment with Streptomyces AGN23 culture supernatants
13.6 5.3 2.6 SRP112501 SRR5831044 Combining chemical and genetic approaches to increase drought resistance in plants
13.4 -3.5 -3.9 SRP114806 SRR5894633 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
12.8 -3.8 -3.4 SRP308553 SRR13805909 The lncRNA APOLO and the methylcytosine-binding protein VIM1 are thermomorphogenesis regulators
12.7 3.7 3.4 SRP303755 SRR13575802 Arabidopsis thaliana Transcriptome or Gene expression
12.1 4.2 2.9 SRP282437 SRR12642100 Complementary capability of cell division and photosynthesis triggers growth vigor in Arabidopsis hybrids
12.0 -2.6 -4.6 SRP150217 SRR7289547 Widespread inter-individual gene expression variability in Arabidopsis thaliana
12.0 -2.0 -6.0 SRP111550 SRR5817863 Transcriptome analysis using RNA sequencing conducted for wild type (Col-0), ahl10-1 and rrp6l1-2 mutant under control conditions and after 96 h at moderate low water potential (-0.7 MPa)
11.9 2.2 5.4 SRP044776 SRR1523884 High-resolution tissue-specific analysis of the Arabidopsis transcriptome in response to shade
11.8 -2.6 -4.6 SRP150217 SRR7289585 Widespread inter-individual gene expression variability in Arabidopsis thaliana
11.7 -2.5 -4.6 SRP150217 SRR7289570 Widespread inter-individual gene expression variability in Arabidopsis thaliana
11.6 4.2 2.8 SRP282437 SRR12642102 Complementary capability of cell division and photosynthesis triggers growth vigor in Arabidopsis hybrids
11.5 -2.3 -5.0 SRP254970 SRR11468723 Multifactorial stress combination
11.3 -3.3 -3.4 SRP252640 SRR11300784 XPO4 negatively regulates immune activation in the cpr5 mutant
11.2 -4.3 -2.6 SRP017386 SRR627682 Transcriptome-wide analysis of gene expression in dark-grown WT and pif mutant seedlings
11.1 3.9 2.9 SRP125388 SRR6312347 Transcriptome dynamics at Arabidopsis graft junctions reveal an intertissue recognition mechanism that activates vascular regeneration
10.9 3.2 3.4 SRP112501 SRR5831030 Combining chemical and genetic approaches to increase drought resistance in plants
10.7 -3.8 -2.8 SRP075455 SRR3547936 The Proteasome Stress Regulon is Controlled by a Pair of NAC Transcription Factors in Arabidopsis
10.6 -3.9 -2.7 SRP187156 SRR8648403 Genome-wide profiling of Arabidopsis thaliana Col-0 and ein2/jar1 host responses to Macrophomina phaseolina infection
10.5 -2.9 -3.6 SRP304983 SRR13646711 Transcriptome in WT Col-0 and mik2-1 mutant upon SCOOP12 treatment.
10.5 -3.1 -3.4 SRP044746 SRR3046811 Cryptochromes interact directly with PIFs to control plant growth in limiting blue light
10.4 3.7 2.8 SRP125388 SRR6312348 Transcriptome dynamics at Arabidopsis graft junctions reveal an intertissue recognition mechanism that activates vascular regeneration
10.1 2.6 3.9 SRP222258 SRR15122077 A Genome-Scale TF-DNA Interaction Network for Transcriptional Regulation of Arabidopsis Primary and Specialized Metabolism
10.0 -1.9 -5.3 SRP101274 SRR5308791 During development, the Sku5 mutant roots engage different genes than wild type WS roots, either on the ground or in spaceflight.
Note: Samples whose contribution is more than 10 are outputted.



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