CoexViewer

Coexpression detail for NHL3 and RDUF1
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath NHL3 NDR1/HIN1-like 3 830520 At5g06320 0.84 7.73 7.44 5.92 23.50 2.87 3.81 3.77 3.58 3.86 3.66
ath RDUF1 zinc finger (C3HC4-type RING finger) family protein 823815 At3g46620 0.84
Platform:

coex z = 7.4429



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 830520
(z-scored expression)		 823815
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
23.6 4.8 4.9 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
21.3 4.0 5.3 SRP230790 SRR10502568 H3K27me3 and H3K4me3 profiles in chr4/pkr1 and WT [RNA-seq]
20.8 -4.1 -5.1 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
18.8 4.5 4.1 SRP325022 SRR14877257 Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells
18.3 3.9 4.7 ERP123539 ERR4471740 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
17.0 3.6 4.7 SRP112501 SRR5831044 Combining chemical and genetic approaches to increase drought resistance in plants
16.8 3.7 4.6 ERP123539 ERR4471742 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
16.5 3.7 4.4 ERP123539 ERR4471741 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
16.2 -5.2 -3.1 ERP115370 ERR3333443 Arabidopsis tissue atlas
14.4 3.0 4.8 SRP051513 SRR1734322 Alterations to hormone regulated defense and stress response networks contribute to the greater growth of Arabidopsis F1 hybrids
14.0 -4.5 -3.1 ERP106238 ERR2245583 PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis
13.1 3.5 3.8 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
12.4 3.7 3.3 SRP277946 SRR12469632 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.2 4.0 3.1 SRP101641 SRR5330630 Chloroplast signalling gates thermotolerance in Arabidopsis
12.1 -3.5 -3.5 SRP361288 SRR18124836 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
12.1 3.3 3.7 SRP277946 SRR12470065 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.0 -3.1 -3.9 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
11.7 3.6 3.3 SRP041308 SRR1257405 Global variation of gene expression induced by constitutive activation of the NIK receptor in Arabidopsis
11.6 -3.2 -3.7 SRP150217 SRR7289601 Widespread inter-individual gene expression variability in Arabidopsis thaliana
11.5 3.3 3.4 SRP277946 SRR12470192 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.3 -4.0 -2.8 SRP266133 SRR11934552 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
11.2 -3.3 -3.4 SRP150217 SRR7289599 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.9 -3.4 -3.2 SRP297585 SRR13239294 mRNA profiling of Trihelix transcription factor ASIL mutants at the late heart stage embryos
10.9 3.4 3.2 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
10.9 3.2 3.4 SRP097877 SRR5205617 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
10.9 -3.3 -3.3 SRP093913 SRR5054306 Transcriptome analysis after ectopically expressing KAN1 in SAM epidermis
10.6 -3.3 -3.2 SRP361288 SRR18124820 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
10.4 3.4 3.1 SRP136812 SRR6919642 The SOG1 transcriptional activator and the MYB3R family of repressors control a complex gene network in response to DNA damage in Arabidopsis [RNA-seq DREMmodel]
10.3 -3.3 -3.1 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
10.3 3.8 2.7 SRP199288 SRR9113131 In Arabidopsis hybrids and Hybrid Mimics up-regulation of cell wall biogenesis is associated with increased plant size
10.1 -4.2 -2.4 SRP266133 SRR11934437 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
Note: Samples whose contribution is more than 10 are outputted.



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