[←][→] ath   At3g46620 Gene
functional annotation
Function   zinc finger (C3HC4-type RING finger) family protein      
GO BP
GO:0051865 [list] [network] protein autoubiquitination  (17 genes)  IDA  
GO:0009414 [list] [network] response to water deprivation  (1006 genes)  IMP  
GO:0009737 [list] [network] response to abscisic acid  (1086 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA ISM  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  IDA  
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (261 genes)  IDA  
KEGG
Protein NP_190246.1 
BLAST NP_190246.1 
Orthologous [Ortholog page] RHC2A (ath)  RDUF2 (ath)  LOC4326393 (osa)  LOC4332393 (osa)  LOC4337586 (osa)  LOC7454941 (ppo)  LOC7468627 (ppo)  LOC7485690 (ppo)  LOC7490384 (ppo)  LOC11414430 (mtr)  LOC11419123 (mtr)  LOC11433768 (mtr)  LOC25489325 (mtr)  LOC100784364 (gma)  LOC100784822 (gma)  LOC100789228 (gma)  LOC100792020 (gma)  LOC100792874 (gma)  LOC100798563 (gma)  LOC100804867 (gma)  LOC100807324 (gma)  LOC101256865 (sly)  LOC101256882 (sly)  LOC103845376 (bra)  LOC103851573 (bra)  LOC103856624 (bra)  LOC103857876 (bra)  LOC103861302 (bra)  LOC103867017 (bra)  LOC106796723 (gma)  LOC121172634 (gma)  LOC123045029 (tae)  LOC123063677 (tae)  LOC123072826 (tae)  LOC123080990 (tae)  LOC123085431 (tae)  LOC123092613 (tae)  LOC123097918 (tae)  LOC123104185 (tae)  LOC123179939 (tae)  LOC123186642 (tae)  LOC123441568 (hvu)  LOC123443564 (hvu)  LOC123445686 (hvu)  LOC123449031 (hvu) 
Subcellular
localization
wolf
chlo 9,  nucl 1,  mito 1  (predict for NP_190246.1)
Subcellular
localization
TargetP
other 8  (predict for NP_190246.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with RDUF1 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
13.3 RDUF2 zinc finger (C3HC4-type RING finger) family protein [detail] 836074
12.9 CZF1 zinc finger (CCCH-type) family protein [detail] 818605
12.1 ERF5 ethylene responsive element binding factor 5 [detail] 834770
10.8 RHL41 C2H2-type zinc finger family protein [detail] 836103
10.8 BAP1 BON association protein 1 [detail] 825291
10.6 AT3G10930 uncharacterized protein [detail] 820264
9.7 AT1G23710 hypothetical protein (DUF1645) [detail] 838981
9.5 PBP1 pinoid-binding protein 1 [detail] 835537
9.3 GATL10 galacturonosyltransferase-like 10 [detail] 822462
8.7 UCP5 uncoupling protein 5 [detail] 816783
8.5 CMPG2 CYS, MET, PRO, and GLY protein 2 [detail] 836587
8.0 AT1G72950 Disease resistance protein (TIR-NBS class) [detail] 843626
7.1 AT5G66650 calcium uniporter (DUF607) [detail] 836797
6.9 AT4G32020 serine/arginine repetitive matrix-like protein [detail] 829333
6.4 AT1G03730 pyrroline-5-carboxylate reductase [detail] 839106
5.7 AT1G61470 Polynucleotidyl transferase, ribonuclease H-like superfamily protein [detail] 842441
Coexpressed
gene list		 [Coexpressed gene list for RDUF1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
252474_at
252474_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
252474_at
252474_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
252474_at
252474_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 823815      
Refseq ID (protein) NP_190246.1 


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