Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.4   RDUF1   zinc finger (C3HC4-type RING finger) family protein 
 ath-r.6   RDUF1   zinc finger (C3HC4-type RING finger) family protein 
 ath-m.9   RDUF1   zinc finger (C3HC4-type RING finger) family protein 
 ath-m.4.notissue   RDUF1   zinc finger (C3HC4-type RING finger) family protein 
 ath-m.4.tis   RDUF1   zinc finger (C3HC4-type RING finger) family protein 
 ath-m.4.str   RDUF1   zinc finger (C3HC4-type RING finger) family protein 
 ath-m.4.hor   RDUF1   zinc finger (C3HC4-type RING finger) family protein 
 ath-m.4.bio   RDUF1   zinc finger (C3HC4-type RING finger) family protein 
 ath-m.4.lig   RDUF1   zinc finger (C3HC4-type RING finger) family protein 
 ath-e.1   RDUF1   zinc finger (C3HC4-type RING finger) family protein 
 ath-u.4   RHC2A   RING-H2 finger C2A 
 ath-u.4   RDUF2   zinc finger (C3HC4-type RING finger) family protein 
 gma-u.4   100784822   E3 ubiquitin-protein ligase RDUF2 
 gma-u.4   100798563   E3 ubiquitin-protein ligase RDUF1 
 ppo-u.4   7490384   probable E3 ubiquitin-protein ligase RHC2A 
 ppo-u.4   7454941   E3 ubiquitin-protein ligase RDUF2 
 ppo-u.4   7468627   E3 ubiquitin-protein ligase RDUF1 
 mtr-u.4   25489325   probable E3 ubiquitin-protein ligase RHC2A 
 mtr-u.4   11414430   E3 ubiquitin-protein ligase RDUF2 
 sly-u.4   101256865   probable E3 ubiquitin-protein ligase RHC2A 
 sly-u.4   101256882   probable E3 ubiquitin-protein ligase RHC2A 
 osa-u.4   4332393   E3 ubiquitin-protein ligase RDUF2 
 osa-u.4   4337586   E3 ubiquitin-protein ligase RDUF2 
 osa-u.4   4326393   probable E3 ubiquitin-protein ligase RHC2A 

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Top 50 coexpressed genes to RDUF1 (ath-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 ath4626   Plant-pathogen interaction  3 170 2.04
 ath3018   RNA degradation  2 113 -
 ath270   Cysteine and methionine metabolism  1 124 -
 ath4016   MAPK signaling pathway - plant  2 139 -

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ath:RDUF1 (zinc finger (C3HC4-type RING finger) family protein) External Links;


Show/Hide Columns:        
Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition specific* Reference

ath-u.4
for
RDUF1
ath-r.6
for
RDUF1
ath-m.9
for
RDUF1
ath-m.4.notissue
for
RDUF1
ath-m.4.tis
for
RDUF1
ath-m.4.str
for
RDUF1
ath-m.4.hor
for
RDUF1
ath-m.4.bio
for
RDUF1
ath-m.4.lig
for
RDUF1
ath-e.1
for
RDUF1
ath-u.4
for
RHC2A
ath-u.4
for
RDUF2
gma-u.4
for
100784822
gma-u.4
for
100798563
ppo-u.4
for
7490384
ppo-u.4
for
7454941
ppo-u.4
for
7468627
mtr-u.4
for
25489325
mtr-u.4
for
11414430
sly-u.4
for
101256865
sly-u.4
for
101256882
osa-u.4
for
4332393
osa-u.4
for
4337586
osa-u.4
for
4326393
1 RDUF2 zinc finger (C3HC4-type RING finger) family protein 836074 At5g59550 13.3 13.2
 9.9
 6.5
 4.6
 3.7
 4.8
 4.4
 0.5
 11.1
 1.9
0.7
 13.3
1.9
 9.2
3.2
 3.6
2.5
 4.4
1.2
 2.6
2.1
 9.2
2.6
 2.6
2.4
 14.5
2.4
 0.6
 0.6
 3.1
1.2
 7.5
3.1
 7.5
1.2
2 CZF1 zinc finger (CCCH-type) family protein 818605 At2g40140 12.9 12.4
 9.9
 6.3
 4.3
 5.1
 3.3
 3.6
 0.8
 11.6
 1.0
-0.0
 9.5
9.5
 2.3
2.1
 2.9
1.4
 2.0
1.5
 3.6
2.7
 7.9
5.9
 3.1
1.2
 12.3
8.7
 0.3
-0.5
 10.6
1.5
 4.0
 5.2
 5.2
3 ERF5 ethylene responsive element binding factor 5 834770 At5g47230 12.1 12.1
 8.9
 6.7
 3.0
 5.3
 2.4
 4.1
 1.7
 9.2
 -0.4
-0.5
 9.1
7.8
 2.1
2.1
 1.1
0.8
 2.4
1.3
 3.3
2.9
 6.5
6.4
 1.6
1.4
 8.7
5.1
 -1.3
-1.7
 6.0
4.9


4 AT4G29780 nuclease 829100 At4g29780 11.9 10.7
 9.9
 6.2
 4.4
 4.0
 3.6
 4.7
 2.0
 11.9
 0.3
 10.8











5 STZ salt tolerance zinc finger 839666 At1g27730 11.9 10.4
 10.1
 2.0
 3.1
 5.5
 3.2
 5.4
 2.8
 8.9
 0.5
0.5
 9.3
7.2
 2.7
1.9
 1.9
0.8
 2.3
2.0
 2.8
2.3
 7.0
6.2
 2.7
2.6
 9.7
6.6
 -0.2
-0.6
 7.5
5.1
 1.5
1.0
 2.9
1.8
 3.9
0.9
6 DIC2 dicarboxylate carrier 2 828559 At4g24570 11.6 9.4
 10.7
 4.5
 3.9
 4.4
 3.2
 5.6
 1.0
 7.4
 1.5
1.4
 10.4
6.8
 1.8
1.2
 1.2
0.9
 2.0
1.9
 2.1
1.5
 5.6
5.1
 1.4
-0.1
 3.5
1.9
 0.7
-1.3
 5.6
5.5
 2.7
 2.7
 3.0
7 AT4G27280 Calcium-binding EF-hand family protein 828836 At4g27280 11.5 10.3
 9.6
 28.3
 4.7
 3.6
 3.9
 4.8
 0.6
 7.7
 0.5
-0.5
 7.6
5.5
 1.6
1.5
 2.0
1.8
 1.6
0.9
 2.0
2.0
 6.5
6.4
 1.2
1.1
 9.3
5.3
 -0.6
-0.7
 7.4
7.0
 1.5
1.0
 6.3
2.2
 8.0
2.9
8 NUDT21 nudix hydrolase homolog 21 843688 At1g73540 11.3 9.7
 9.7
 12.5
 3.8
 3.7
 3.4
 5.4
 -0.8
 16.6
 -0.0
-0.7
 10.1
9.0
 2.7
1.2
 1.4
0.7
 0.7
0.7
 2.0
1.3
 3.7
2.6
 2.3
1.3
 7.0
5.6
 1.7
-0.3
 1.2
0.1
 2.1
0.9
 5.4
2.6
 7.6
1.8
9 RHL41 C2H2-type zinc finger family protein 836103 At5g59820 10.8 10.4
 8.4
 22.8
 5.2
 4.0
 3.2
 3.1
 3.6
 10.4
 0.2
0.2
 6.7
3.3
 1.7
1.6
 1.4
1.1
 0.6
0.4
 1.8
1.7
 7.1
3.2
 1.1
0.8
 10.8
2.2
 -0.3
-1.5
 4.2
2.5


10 BAP1 BON association protein 1 825291 At3g61190 10.8 9.1
 9.5
 11.8
 5.7
 4.4
 2.2
 4.0
 0.8
 10.1
 0.4
-0.4
 7.0
0.8
 1.7
1.3
 1.7
1.5
 0.8
0.0
 3.2
2.1
 7.7
5.4
 1.9
1.9
 6.1
5.1
 -1.0
 5.7


11 CAF1a Polynucleotidyl transferase, ribonuclease H-like superfamily protein 823551 At3g44260 10.7 8.9
 9.6
 9.4
 3.5
 4.3
 3.3
 5.0
 1.8
 9.0
 0.2
-0.1
 10.2
8.9
 2.6
2.4
 3.0
1.7
 2.0
1.1
 2.0
2.0
 7.3
6.4
 1.9
1.8
 6.7
6.6
 0.4
0.4
 9.1
2.7
 1.7
 7.2
 6.8
12 AT3G10930 uncharacterized protein 820264 At3g10930 10.6 9.7
 8.7
 13.8
 3.3
 4.0
 2.8
 5.0
 0.2
 9.2













13 ERF104 ethylene response factor 104 836281 At5g61600 10.4 9.2
 8.9
 27.7
 3.8
 3.9
 4.0
 3.9
 0.7
 9.3
 -1.0
 7.0











14 ACS6 1-aminocyclopropane-1-carboxylic acid (acc) synthase 6 826730 At4g11280 10.4 9.7
 8.3
 11.0
 4.6
 4.3
 4.7
 3.9
 0.1
 8.7
 -0.3
-0.3
 10.1
0.0
 1.1
0.9
 1.5
0.3
 -0.2
-0.3
 0.7
0.1
 5.6
0.5
 1.5
0.8
 2.3
0.7
 0.1
0.0
 3.3
3.0
 0.7
 1.8
 0.6
15 ATL2 TOXICOS EN LEVADURA 2 820924 At3g16720 10.4 10.7
 7.2
 18.0
 3.0
 4.2
 3.1
 3.6
 1.1
 7.1
 2.1
0.4
 10.5
1.8
 2.5
1.6
 1.1
0.9
 1.7
1.6
 2.9
2.7
 4.8
3.5
 2.0
-1.2
 7.7
-0.8
 -0.4
-0.9
 7.5
0.1


16 AT2G30020 Protein phosphatase 2C family protein 817553 At2g30020 10.2 11.3






12.1
 0.8
0.2
 10.4
1.9
 1.9
1.2
 1.0
0.5
 1.8
0.2
 2.6
1.6
 6.2
3.8
 2.3
-0.1
 11.5
0.9
 0.1
-1.0
 7.5
7.0
 4.2
 7.7
 7.5
17 CAF1b Polynucleotidyl transferase, ribonuclease H-like superfamily protein 832285 At5g22250 10.1 9.5
 7.9
 14.0
 3.2
 3.7
 2.7
 4.9
 2.2
 9.7
 0.2
-0.1
 10.2
8.9
 2.6
2.4
 3.0
1.7
 2.0
1.1
 2.0
2.0
 7.3
6.4
 1.9
1.8
 6.7
6.6
 0.4
0.4
 9.1
2.7
 1.7
 7.2
 6.8
18 AT2G39650 cruciferin (DUF506) 818548 At2g39650 9.8 9.0
 7.9
 33.4
 4.4
 3.9
 2.8
 3.7
 0.9
 6.7
 0.1
 6.6
 1.9
1.2
 2.5
1.8
 2.5
1.9
 3.0
1.8
 2.7
0.9
 1.6
 0.9
 0.0
 0.9
 1.8
 -0.4
 0.1
19 AT1G23710 hypothetical protein (DUF1645) 838981 At1g23710 9.7 9.3
 7.5
 17.4
 3.4
 3.7
 3.6
 4.3
 4.4
 10.8
 1.1
0.2
 10.3
3.2
 3.8
3.2
 2.4
2.1
 2.0
1.8
 1.5
1.3
 1.7
1.6
 4.1
2.3
 7.4
2.5
 0.3
0.1
 6.6
2.1
 2.8
2.0
 2.4
0.5
 1.9
0.9
20 PBP1 pinoid-binding protein 1 835537 At5g54490 9.5 8.5
 7.8
 9.5
 3.2
 4.5
 3.6
 5.3
 1.5
 7.9
 0.5
-0.5
 7.6
5.5
 1.6
1.5
 2.0
1.8
 1.6
0.9
 2.0
2.0
 6.5
6.4
 1.2
1.1
 9.3
5.3
 -0.6
-0.7
 7.4
7.0
 1.5
1.0
 6.3
2.2
 8.0
2.9
21 SZF1 salt-inducible zinc finger 1 824764 At3g55980 9.4 8.4
 7.9
 8.5
 3.4
 4.1
 3.6
 4.7
 2.5
 5.4
 1.0
-0.0
 9.5
9.5
 2.3
2.1
 2.9
1.4
 2.0
1.5
 3.6
2.7
 7.9
5.9
 3.1
1.2
 12.3
8.7
 0.3
-0.5
 10.6
1.5
 4.0
 5.2
 5.2
22 GATL10 galacturonosyltransferase-like 10 822462 At3g28340 9.3 9.1
 6.9
 4.2
 3.2
 5.2
 3.4
 4.1
 0.3
 9.2
 3.9
1.4
 7.7
1.0
 2.7
2.0
 2.8
1.7
 2.1
1.7
 1.2
0.2
 9.1
1.1
 2.1
1.8
 4.9
0.3
 0.4
-0.1
 9.8
1.6
 2.9
2.0
 5.2
3.0
 4.3
2.4
23 NUDT4 nudix hydrolase homolog 4 838410 At1g18300 8.9 9.7






15.4
 -0.0
-0.7
 10.1
9.0
 2.7
1.2
 1.4
0.7
 0.7
0.7
 2.0
1.3
 3.7
2.6
 2.3
1.3
 7.0
5.6
 1.7
-0.3
 1.2
0.1
 2.1
0.9
 5.4
2.6
 7.6
1.8
24 UCP5 uncoupling protein 5 816783 At2g22500 8.7 7.7
 7.3
 26.2
 3.3
 3.5
 2.7
 3.6
 3.2
 5.1
 1.5
1.4
 10.4
6.8
 1.8
1.2
 1.2
0.9
 2.0
1.9
 2.1
1.5
 5.6
5.1
 1.4
-0.1
 3.5
1.9
 0.7
-1.3
 5.6
5.5
 2.7
 2.7
 3.0
25 CML23 calmodulin like 23 842958 At1g66400 8.6 7.8
 7.1
 78.5
 3.6
 3.0
 1.8
 2.7
 0.9
 6.4
 2.2
0.2
 5.7
5.1
 2.1
2.1
 1.8
1.3
 1.2
-0.0
 0.7
-0.3
 2.4
2.1
 3.6
0.3
 3.9
1.9
 0.8
0.5
 5.0
1.6
 2.4
1.2
 2.8
1.5
 4.5
2.5
26 CMPG2 CYS, MET, PRO, and GLY protein 2 836587 At5g64660 8.5 9.2
 5.6
 9.6
 3.7
 4.1
 1.8
 3.7
 -0.4
 8.9
 0.3
-0.3
 8.9
3.9
 2.0
1.7
 2.5
2.5
 1.3
0.1
 0.8
0.5
 5.5
0.7
 1.4
0.7
 3.4
2.5
 1.5
-0.4
 10.3
1.7
 1.3
1.3
 3.5
2.9
 4.0
1.8
27 ERF4 ethylene responsive element binding factor 4 820752 At3g15210 8.1 9.0
 5.1
 42.4
 4.3
 3.3
 1.8
 3.7
 3.3
 8.6
 1.3
0.5
 10.1
7.4
 3.8
3.6
 1.6
1.5
 1.5
1.1
 2.8
2.6
 8.2
7.9
 3.0
2.5
 7.9
6.1
 2.0
1.7
 10.6
9.3
 5.2
3.3
 6.0
2.7
 6.6
3.4
28 AT3G56880 VQ motif-containing protein 824855 At3g56880 8.1 7.4
 6.6
 8.0
 2.4
 3.9
 3.5
 5.1
 2.8
 7.8
 1.4
1.0
 7.3
5.1
 2.0
1.7
 1.9
1.3
 0.6
-0.1
 3.2
2.4
 6.4
5.4
 3.0
 5.8
 0.7
0.4
 5.4
3.8
 1.6
1.3
 4.4
0.2
 6.2
0.2
29 AT1G72950 Disease resistance protein (TIR-NBS class) 843626 At1g72950 8.0 8.2
 5.7
 67.2
 3.6
 4.1
 0.3
 2.0
 0.0
 7.0
 -0.8
-1.0
 4.9
4.9











30 NAC062 NAC domain containing protein 62 824115 At3g49530 7.9 7.3
 6.4
 16.0
 4.9
 3.9
 3.9
 3.7
 3.0
 5.4
 1.9
-0.2
 7.5
5.2
 0.5
-0.7
 0.7
0.5
 0.9
-0.1
 1.1
1.0
 5.3
1.6
 3.5
3.3
 4.9
2.0
 0.9
-0.5
 3.0
2.2


31 ZAT6 6 830313 At5g04340 7.9 7.9
 5.7
 14.3
 1.8
 3.9
 2.3
 4.5
 2.5
 8.1
 0.5
0.5
 9.3
7.2
 2.7
1.9
 1.9
0.8
 2.3
2.0
 2.8
2.3
 7.0
6.2
 2.7
2.6
 9.7
6.6
 -0.2
-0.6
 7.5
5.1
 1.5
1.0
 2.9
1.8
 3.9
0.9
32 AT1G35210 uncharacterized protein 840410 At1g35210 7.8 7.0
 6.5
 62.9
 2.6
 3.2
 1.8
 3.3
 0.6
 5.4
 0.3
-0.1
 6.2
2.3
 2.8
1.6
 1.6
1.5
 1.0
0.3
 2.1
1.0
 5.4
1.0
 1.5
1.0
 5.7
5.6
 -0.7
-1.0
 5.0
1.2


33 AT4G27652 uncharacterized protein 828877 At4g27652 7.8 7.0
 6.5
 46.0
 3.9
 3.5
 1.8
 3.8
 3.2
 9.4













34 NHL3 NDR1/HIN1-like 3 830520 At5g06320 7.7 7.4
 5.9
 23.5
 2.9
 3.8
 3.8
 3.6
 3.9
 3.7
 2.0
0.3
 6.2
4.1
 1.8
1.6
 3.5
1.7
 1.5
0.5
 1.2
0.3
 3.7
3.3
 1.8
1.6
 3.4
3.3
 -0.4
-0.5
 5.4
0.0
 1.2
 9.3
 7.0
35 AT1G76600 poly polymerase 843993 At1g76600 7.7 7.3
 6.0
 47.0
 3.5
 3.0
 2.3
 4.0
 1.0
 7.6
 1.6
0.8
 7.4
2.5

1.6
1.5
 1.7
1.1
 5.7
3.7

-0.6
 7.7


36 MKK9 MAP kinase kinase 9 843685 At1g73500 7.7 7.2
 6.0
 41.0
 2.8
 3.7
 3.3
 2.4
 5.0
 5.4
 -0.0
 7.2
 2.4
2.4
 0.5
-0.9
 1.2
-0.6
 4.0
2.3
 3.0
2.3
 1.1
 1.9
 1.3
 2.3
 2.5
 2.6
 2.7
37 AT3G04640 glycine-rich protein 819622 At3g04640 7.7 7.7
 5.6
 10.0
 3.0
 4.0
 3.6
 4.5
 1.8
 5.1
 0.3
 8.6











38 ERF6 ethylene responsive element binding factor 6 827463 At4g17490 7.6 6.8
 6.4
 15.1
 3.1
 4.5
 2.7
 4.1
 2.9
 4.7
 -0.4
-0.5
 9.1
7.8
 2.1
2.1
 1.1
0.8
 2.4
1.3
 3.3
2.9
 6.5
6.4
 1.6
1.4
 8.7
5.1
 -1.3
-1.7
 6.0
4.9


39 AT3G25600 Calcium-binding EF-hand family protein 822147 At3g25600 7.4 7.0
 5.9
 32.2
 2.4
 3.6
 2.5
 4.8
 0.3
 3.9
 1.3
 5.4
 2.6
 -0.2
 -0.1
 -0.0
 1.6
 1.6
0.7
 5.4
0.5
 1.1
 2.0
 1.4
 3.4
 5.0
40 AT1G32920 uncharacterized protein 28717292 At1g32920 7.4 8.0






5.7
 -0.8
 9.0











41 AT1G18740 ROH1, putative (DUF793) 838456 At1g18740 7.4 6.9
 5.9
 44.2
 4.2
 3.5
 0.7
 4.1
 2.6
 7.3
 0.4
0.2
 6.5
6.1
 3.9
3.0
 2.3
1.9
 2.1
1.3
 1.1
0.4
 5.5
4.0
 2.5
2.0
 7.9
4.4
 2.5
1.8
 6.9
4.3


42 AT1G07135 glycine-rich protein 837224 At1g07135 7.4 7.7






7.0
 -0.2
 6.5











43 TCH2 EF hand calcium-binding protein family 833755 At5g37770 7.2 6.4
 6.1
 68.6
 3.3
 3.0
 2.3
 3.9
 4.8
 5.1
 2.2
0.2
 5.7
5.1
 2.1
2.1
 1.8
1.3
 1.2
-0.0
 0.7
-0.3
 2.4
2.1
 3.6
0.3
 3.9
1.9
 0.8
0.5
 5.0
1.6
 2.4
1.2
 2.8
1.5
 4.5
2.5
44 AT5G66650 calcium uniporter (DUF607) 836797 At5g66650 7.1 6.7
 5.7
 53.6
 3.1
 4.3
 1.7
 2.1
 0.3
 6.0
 1.6
0.4
 5.5
0.6
 0.9
0.6
 0.3
0.1
 1.0
0.9
 0.3
-0.2
 0.2
-0.0
 0.9
-0.0
 0.5
0.1
 1.3
0.6
 1.5
0.7
 -0.0
 -0.2
 -0.8
45 AT5G17350 uncharacterized protein 831601 At5g17350 7.1 6.2
 6.2
 32.4
 3.4
 3.9
 2.3
 3.1
 2.1
 6.6
 0.1
-0.4
 6.5
1.4
 1.0
0.5
 1.2
0.9
 1.9
 2.6
 4.4
 2.5
 10.7
 -0.4
-1.2
 9.8
5.9
 1.3
0.6
 3.2
1.6
 4.1
1.8
46 WRKY40 WRKY DNA-binding protein 40 844423 At1g80840 7.0 6.0
 6.1
 27.4
 3.2
 3.9
 1.8
 4.0
 1.6
 6.0
 0.3
-0.3
 7.9
2.4
 0.9
0.6
 1.5
0.6
 1.5
0.7
 2.8
2.7
 4.6
3.2
 1.8
1.3
 5.0
3.7
 -0.2
-1.1
 6.3
2.1
 0.6
 0.1
 0.3
47 AT3G02840 ARM repeat superfamily protein 821225 At3g02840 7.0 5.7
 6.3
 42.3
 3.0
 3.4
 2.3
 3.3
 -0.3
 6.2
 -0.3
 6.1











48 AT4G32020 serine/arginine repetitive matrix-like protein 829333 At4g32020 6.9 6.6
 5.3
 7.7
 3.6
 3.6
 3.7
 4.1
 2.5
 4.4
 3.2
2.8
 6.0
5.1
 3.7
3.2
 2.9
2.7
 3.6
2.2
 2.7
1.6
 5.9
5.6
 6.3
3.8
 6.7
5.4
 3.0
2.7
 9.9
6.1
 1.8
 7.2
 8.5
49 TET8 tetraspanin8 816913 At2g23810 6.7 6.6
 5.0
 36.8
 3.2
 3.6
 3.7
 3.0
 2.6
 3.0
 -0.2
-0.3
 5.2
1.3
 3.3
0.8
 1.7
-0.2
 -0.2
-1.0
 1.2
0.7
 4.5
-0.8
 0.0
 0.0
 0.3
-0.2
 3.0
0.3
 0.5
0.4
 3.2
1.6
 3.8
0.3
50 AT2G41640 Glycosyltransferase family 61 protein 818762 At2g41640 6.7 6.7
 4.9
 31.3
 2.4
 3.7
 3.7
 3.8
 -0.2
 4.6
 -0.1
-0.1
 6.4
0.2
 1.1
1.0
 1.7
0.3
 1.4
 0.3
 0.1
 2.0
 4.1
 0.1
-0.7
 3.5
0.3
 1.0
 3.0
 4.8
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