cis; CGTGCGG

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
no correspondence

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of CGTGCGG

[Help]
GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of CGTGCGG.

[Help]
correlTFfunction ((alias))*TF family
(link to AGRIS)
no TF correlated.

link to other 304 cis elements in ATTED

similar seq.
←CGTGCGG→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; CCGCACG
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
CGTGCGG1.000.0665
TTCTAGA0.700.1188
TCTAGAA0.660.1580
TCTGGAA0.630.0720
CTCCAGA0.600.0754
CTTCTAG0.600.1090