cis; CCGCACG

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
no correspondence

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of CCGCACG

[Help]
GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of CCGCACG.

[Help]
correlTFfunction ((alias))*TF family
(link to AGRIS)
0.50At5g48655zinc finger (C3HC4-type RING finger) family protein C3H
0.50At1g28370ERF domain protein 11 (ERF11) AP2-EREBP
0.48At1g22510zinc finger (C3HC4-type RING finger) family protein C3H
0.48At5g24590turnip crinkle virus-interacting protein / TCV-interacting protein (TIP) ((TIP)) NAC
0.48At1g01260basic helix-loop-helix (bHLH) family protein BHLH
0.48At5g01380expressed protein Trihelix
0.47At1g80840WRKY family transcription factor ((WRKY40)) WRKY
0.47At4g01250WRKY family transcription factor ((WRKY22)) WRKY
0.46At2g22850bZIP transcription factor family protein bZIP
0.46At5g49520WRKY family transcription factor ((WRKY48)) WRKY
0.46At3g52800zinc finger (AN1-like) family protein C2H2
0.45At3g10800bZIP transcription factor family protein bZIP
0.45At5g43170zinc finger (C2H2 type) protein 3 (AZF3) ((AZF3)) C2H2
-0.45At5g63780zinc finger (C3HC4-type RING finger) family protein C3H
0.45At1g69570Dof-type zinc finger domain-containing protein C2C2-Dof

link to other 304 cis elements in ATTED

similar seq.
←CCGCACG→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; CGTGCGG
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
CCGCACG1.000.06196