cis; CCGCATG

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
no correspondence

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of CCGCATG

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GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of CCGCATG.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.52At3g02340zinc finger (C3HC4-type RING finger) family protein C3H
0.46At3g19290ABA-responsive element-binding protein 2 (AREB2) ((ABF4, AREB2)) bZIP
0.46At4g27410no apical meristem (NAM) family protein (RD26) ((RD26)) NAC
0.46At4g12020protein kinase family protein ((MAPKKK11, WRKY19)) WRKY
-0.45At2g02740transcription factor, putative WHIRLY
0.45At2g46270G-box binding factor 3 (GBF3) ((GBF3)) bZIP
0.45At4g36900AP2 domain-containing protein RAP2.10 (RAP2.10) AP2-EREBP
0.44At4g17230scarecrow-like transcription factor 13 (SCL13) GRAS
0.44At3g19580zinc finger (C2H2 type) protein 2 (AZF2) ((AZF2)) C2H2
0.44At2g37150zinc finger (C3HC4-type RING finger) family protein C3H
-0.43At3g06140zinc finger (C3HC4-type RING finger) family protein C3H
0.43At5g07100WRKY family transcription factor ((WRKY26)) WRKY
0.42At2g46680homeobox-leucine zipper protein 7 (HB-7) / HD-ZIP transcription factor 7 ((ATHB-7)) Homeobox
0.41At5g38895zinc finger (C3HC4-type RING finger) family protein C3H
0.41At3g61890homeobox-leucine zipper protein 12 (HB-12) / HD-ZIP transcription factor 12 ((ATHB-12)) Homeobox

link to other 304 cis elements in ATTED

similar seq.
←CCGCATG→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; CATGCGG
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
CCGCATG1.000.0715