[←][→] ath   At5g48655 Gene
functional annotation
Function   RING/U-box superfamily protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (230 genes)  IGI  
GO CC
GO:0005730 [list] [network] nucleolus  (387 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0032183 [list] [network] SUMO binding  (14 genes)  IPI  
KEGG
Protein NP_001318762.1  NP_001332107.1  NP_001332108.1  NP_568701.1  NP_851156.1  NP_974908.1 
BLAST NP_001318762.1  NP_001332107.1  NP_001332108.1  NP_568701.1  NP_851156.1  NP_974908.1 
Orthologous [Ortholog page] AT3G07200 (ath)  LOC4347500 (osa)  LOC7463430 (ppo)  LOC18096550 (ppo)  LOC25482756 (mtr)  LOC25492825 (mtr)  LOC100306616 (gma)  LOC100682522 (tae)  LOC100778432 (gma)  LOC100792853 (gma)  LOC101249295 (sly)  LOC101256594 (sly)  LOC103837260 (bra)  LOC103849463 (bra)  LOC103854551 (bra)  LOC103874974 (bra)  LOC107276681 (osa)  LOC112416066 (mtr)  LOC112422097 (mtr)  LOC123104288 (tae)  LOC123112543 (tae)  LOC123122042 (tae)  LOC123128709 (tae)  LOC123145835 (tae)  LOC123151737 (tae)  LOC123162011 (tae)  LOC123168597 (tae)  LOC123399707 (hvu)  LOC123406333 (hvu)  LOC123411186 (hvu) 
Subcellular
localization
wolf
chlo 4,  nucl 2,  plas 2,  chlo_mito 2,  nucl_plas 2  (predict for NP_001318762.1)
chlo 4,  nucl 2,  plas 2,  chlo_mito 2,  nucl_plas 2  (predict for NP_001332107.1)
chlo 4,  nucl 2,  plas 2,  chlo_mito 2,  nucl_plas 2  (predict for NP_001332108.1)
chlo 4,  nucl 2,  plas 2,  chlo_mito 2,  nucl_plas 2  (predict for NP_568701.1)
chlo 4,  nucl 2,  plas 2,  chlo_mito 2,  nucl_plas 2  (predict for NP_851156.1)
chlo 4,  nucl 2,  plas 2,  chlo_mito 2,  nucl_plas 2  (predict for NP_974908.1)
Subcellular
localization
TargetP
other 7,  mito 4  (predict for NP_001318762.1)
other 7,  mito 4  (predict for NP_001332107.1)
other 7,  mito 4  (predict for NP_001332108.1)
other 7,  mito 4  (predict for NP_568701.1)
other 7,  mito 4  (predict for NP_851156.1)
other 7,  mito 4  (predict for NP_974908.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT5G48655 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
8.4 SAP7 A20/AN1-like zinc finger family protein [detail] 826812
6.3 AT3G61980 serine protease inhibitor, Kazal-type family protein [detail] 825371
6.1 VPS28-1 vacuolar protein sorting-associated protein-like protein [detail] 828241
6.1 AT4G38940 Galactose oxidase/kelch repeat superfamily protein [detail] 830049
6.0 AT1G15430 hypothetical protein (DUF1644) [detail] 838114
Coexpressed
gene list		 [Coexpressed gene list for AT5G48655]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248665_at
248665_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248665_at
248665_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248665_at
248665_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 834923      
Refseq ID (protein) NP_001318762.1 
NP_001332107.1 
NP_001332108.1 
NP_568701.1 
NP_851156.1 
NP_974908.1 


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