cis; GCATGGA


Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
no correspondence

CEG profile for position preference


CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of GCATGGA

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GO IDterm-Log(p)number of
{A; genes in a GO}
numver of
{B; genes with this heptamer}
{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of GCATGGA.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.52At1g14410DNA-binding protein-related WHIRLY
-0.50At3g02340zinc finger (C3HC4-type RING finger) family protein C3H
-0.47At4g27410no apical meristem (NAM) family protein (RD26) ((RD26)) NAC
0.46At1g71260expressed protein WHIRLY
0.45At2g02740transcription factor, putative WHIRLY
-0.45At5g67300myb family transcription factor MYB
-0.45At5g04340zinc finger (C2H2 type) family protein ((C2H2)) C2H2
0.45At3g57150dyskerin, putative / nucleolar protein NAP57, putative ((NAP57)) NAC
0.45At5g16070chaperonin, putative TCP
-0.44At1g08320bZIP family transcription factor bZIP
-0.44At3g62420bZIP transcription factor family protein bZIP
0.44At4g3093050S ribosomal protein L21, mitochondrial (RPL21M) ((WRKY32)) WRKY
-0.43At3g52800zinc finger (AN1-like) family protein C2H2
-0.43At5g07100WRKY family transcription factor ((WRKY26)) WRKY
-0.43At4g33940zinc finger (C3HC4-type RING finger) family protein C3H

link to other 304 cis elements in ATTED

similar seq.
GCATGGA
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; TCCATGC
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
GCATGGA1.000.0748
GTGCACG0.670.0618
CCGTGCA0.640.0752