[][] ath   AT1G04990 Gene
functional annotation
Function   Zinc finger C-x8-C-x5-C-x3-H type family protein
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IEA ISM  
GO MF
GO:0004518 [list] [network] nuclease activity  (252 genes)  IEA  
GO:0003729 [list] [network] mRNA binding  (1026 genes)  IDA  
GO:0003677 [list] [network] DNA binding  (2280 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
KEGG
Protein NP_001318923.1  NP_001323178.1  NP_001323179.1  NP_001323180.1  NP_563725.1  NP_973759.1 
BLAST NP_001318923.1  NP_001323178.1  NP_001323179.1  NP_001323180.1  NP_563725.1  NP_973759.1 
Orthologous [Ortholog page] ZFN2 (ath)LOC7458282 (ppo)LOC7468531 (ppo)LOC11435155 (mtr)LOC100246519 (vvi)LOC100792928 (gma)LOC100812856 (gma)LOC103844187 (bra)LOC103857463 (bra)LOC103865234 (bra)LOC103867591 (bra)
Subcellular
localization
wolf
nucl 6,  chlo 2,  extr 1  (predict for NP_001318923.1)
chlo 5,  nucl 2,  extr 1,  vacu 1  (predict for NP_001323178.1)
chlo 5,  nucl 2,  extr 1,  vacu 1  (predict for NP_001323179.1)
nucl 6,  chlo 2,  extr 1  (predict for NP_001323180.1)
nucl 6,  chlo 2,  extr 1  (predict for NP_563725.1)
nucl 6,  chlo 2,  extr 1  (predict for NP_973759.1)
Subcellular
localization
TargetP
other 5  (predict for NP_001318923.1)
scret 6  (predict for NP_001323178.1)
scret 6  (predict for NP_001323179.1)
other 5  (predict for NP_001323180.1)
other 5  (predict for NP_563725.1)
other 5  (predict for NP_973759.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 3
ath04145 Phagosome 3
ath01200 Carbon metabolism 3
ath00010 Glycolysis / Gluconeogenesis 2
ath00620 Pyruvate metabolism 2
Genes directly connected with AT1G04990 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
5.9 AT3G52990 Pyruvate kinase family protein [detail] 824465
5.3 UXS5 UDP-XYL synthase 5 [detail] 823794
5.3 ZFN2 zinc finger nuclease 2 [detail] 817855
Coexpressed
gene list
[Coexpressed gene list for AT1G04990]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
261125_at
261125_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
261125_at
261125_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
261125_at
261125_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 839351    
Refseq ID (protein) NP_001318923.1 
NP_001323178.1 
NP_001323179.1 
NP_001323180.1 
NP_563725.1 
NP_973759.1 


The preparation time of this page was 0.2 [sec].