[←][→] ath   At1g54830 Gene
functional annotation
Function   nuclear factor Y, subunit C3    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:2000306 [list] [network] positive regulation of photomorphogenesis  (8 genes)  IMP  
GO:0048574 [list] [network] long-day photoperiodism, flowering  (19 genes)  IMP  
GO:0009740 [list] [network] gibberellic acid mediated signaling pathway  (42 genes)  IGI  
GO:0010029 [list] [network] regulation of seed germination  (93 genes)  IGI  
GO:0009738 [list] [network] abscisic acid-activated signaling pathway  (159 genes)  IGI  
GO CC
GO:0005829 [list] [network] cytosol  (2559 genes)  RCA  
GO:0005634 [list] [network] nucleus  (10305 genes)  HDA ISM  
GO MF
GO:0003712 [list] [network] transcription coregulator activity  (62 genes)  IDA  
GO:0046982 [list] [network] protein heterodimerization activity  (97 genes)  IEA  
GO:0000976 [list] [network] transcription cis-regulatory region binding  (708 genes)  IPI  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1576 genes)  ISS  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_175880.1  NP_849808.1  NP_974030.1 
BLAST NP_175880.1  NP_849808.1  NP_974030.1 
Orthologous [Ortholog page] CIP2b (sly)  CIP2a (sly)  NF-YC1 (ath)  NF-YC4 (ath)  NF-YC9 (ath)  NF-YC2 (ath)  LOC4328444 (osa)  LOC4341785 (osa)  LOC4345928 (osa)  LOC4347391 (osa)  LOC7454560 (ppo)  LOC7454724 (ppo)  LOC7471426 (ppo)  LOC7473301 (ppo)  LOC7492093 (ppo)  LOC9266204 (osa)  LOC11410747 (mtr)  LOC11429705 (mtr)  LOC11429780 (mtr)  LOC18098802 (ppo)  LOC18102323 (ppo)  NF-YC14 (gma)  NF-YC07 (gma)  NF-YC02 (gma)  NF-YC03 (gma)  NF-YC15 (gma)  NF-YC06 (gma)  NF-YC13 (gma)  NF-YC04 (gma)  LOC101247122 (sly)  LOC103830155 (bra)  LOC103836365 (bra)  LOC103843367 (bra)  LOC103871634 (bra)  LOC103873128 (bra)  LOC103873759 (bra)  LOC112327494 (ppo)  LOC120578221 (mtr)  LOC123085290 (tae)  LOC123092752 (tae)  LOC123098047 (tae)  LOC123104106 (tae)  LOC123112331 (tae)  LOC123121862 (tae)  LOC123132571 (tae)  LOC123136650 (tae)  LOC123144148 (tae)  LOC123149189 (tae)  LOC123151241 (tae)  LOC123160540 (tae)  LOC123162727 (tae)  LOC123167754 (tae)  LOC123168379 (tae)  LOC123399206 (hvu)  LOC123401541 (hvu)  LOC123408918 (hvu)  LOC123411102 (hvu)  LOC123449145 (hvu) 
Subcellular
localization
wolf
nucl 9,  cyto 1,  plas 1,  cyto_plas 1  (predict for NP_175880.1)
nucl 9,  cyto 1,  plas 1,  cyto_plas 1  (predict for NP_849808.1)
nucl 9,  cyto 1,  plas 1,  cyto_plas 1  (predict for NP_974030.1)
Subcellular
localization
TargetP
other 7  (predict for NP_175880.1)
other 7  (predict for NP_849808.1)
other 7  (predict for NP_974030.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
ath03010 Ribosome 3
ath04141 Protein processing in endoplasmic reticulum 2
Genes directly connected with NF-YC3 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
7.0 NF-YC9 nuclear factor Y, subunit C9 [detail] 837417
5.4 SERPIN1 Serine protease inhibitor (SERPIN) family protein [detail] 841182
4.9 AT1G16840 uncharacterized protein [detail] 838255
Coexpressed
gene list		 [Coexpressed gene list for NF-YC3]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
264190_at
264190_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
264190_at
264190_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
264190_at
264190_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 841922      
Refseq ID (protein) NP_175880.1 
NP_849808.1 
NP_974030.1 


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