[←][→] ath   At2g20180 Gene
functional annotation
Function   phytochrome interacting factor 3-like 5    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0010161 [list] [network] red light signaling pathway  (10 genes)  IDA  
GO:0006783 [list] [network] heme biosynthetic process  (14 genes)  IMP  
GO:0010100 [list] [network] negative regulation of photomorphogenesis  (16 genes)  IMP  
GO:0009686 [list] [network] gibberellin biosynthetic process  (22 genes)  IMP  
GO:0009959 [list] [network] negative gravitropism  (25 genes)  IMP TAS  
GO:0010187 [list] [network] negative regulation of seed germination  (27 genes)  IGI IMP  
GO:0010099 [list] [network] regulation of photomorphogenesis  (39 genes)  TAS  
GO:0009740 [list] [network] gibberellic acid mediated signaling pathway  (42 genes)  IMP  
GO:0015995 [list] [network] chlorophyll biosynthetic process  (56 genes)  IMP  
GO:0010029 [list] [network] regulation of seed germination  (93 genes)  TAS  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1656 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA ISM  
GO MF
GO:0010313 [list] [network] phytochrome binding  (4 genes)  IDA  
GO:0042802 [list] [network] identical protein binding  (404 genes)  IPI  
GO:0046983 [list] [network] protein dimerization activity  (421 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (1277 genes)  IDA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1576 genes)  IDA ISS TAS  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_001189559.1  NP_001318252.1  NP_001323901.1  NP_001323902.1  NP_001323903.1  NP_001323904.1  NP_001323905.1  NP_849996.1 
BLAST NP_001189559.1  NP_001318252.1  NP_001323901.1  NP_001323902.1  NP_001323903.1  NP_001323904.1  NP_001323905.1  NP_849996.1 
Orthologous [Ortholog page] LOC7459525 (ppo)  LOC11419484 (mtr)  LOC25484155 (mtr)  LOC100788491 (gma)  LOC100792121 (gma)  LOC100797225 (gma)  LOC101260141 (sly)  LOC101264668 (sly)  LOC117126501 (bra) 
Subcellular
localization
wolf
nucl 10  (predict for NP_001189559.1)
nucl 10  (predict for NP_001318252.1)
nucl 10  (predict for NP_001323901.1)
nucl 10  (predict for NP_001323902.1)
nucl 10  (predict for NP_001323903.1)
nucl 10  (predict for NP_001323904.1)
nucl 10  (predict for NP_001323905.1)
nucl 10  (predict for NP_849996.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001189559.1)
other 9  (predict for NP_001318252.1)
other 9  (predict for NP_001323901.1)
other 9  (predict for NP_001323902.1)
other 9  (predict for NP_001323903.1)
other 9  (predict for NP_001323904.1)
other 9  (predict for NP_001323905.1)
other 9  (predict for NP_849996.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00196 Photosynthesis - antenna proteins 2
ath04075 Plant hormone signal transduction 2
Genes directly connected with PIL5 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
6.7 AT5G54630 zinc finger protein-like protein [detail] 835552
6.2 PIF4 phytochrome interacting factor 4 [detail] 818903
5.8 DRB3 dsRNA-binding protein 3 [detail] 822310
4.4 HB22 homeobox protein 22 [detail] 828568
Coexpressed
gene list		 [Coexpressed gene list for PIL5]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
265584_at
265584_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
265584_at
265584_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
265584_at
265584_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 816538      
Refseq ID (protein) NP_001189559.1 
NP_001318252.1 
NP_001323901.1 
NP_001323902.1 
NP_001323903.1 
NP_001323904.1 
NP_001323905.1 
NP_849996.1 


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