ATTED-II : GeneID search result

[←][→] ath At2g20570 Gene

functional annotation

Function

GBF's pro-rich region-interacting factor 1

GO BP

GO:1900056 [list] [network] negative regulation of leaf senescence	(18 genes)	IMP
GO:0010380 [list] [network] regulation of chlorophyll biosynthetic process	(23 genes)	IGI
GO:0009910 [list] [network] negative regulation of flower development	(55 genes)	IGI
GO:0009658 [list] [network] chloroplast organization	(209 genes)	IMP
GO:0045893 [list] [network] positive regulation of DNA-templated transcription	(272 genes)	IDA IMP
GO:0007165 [list] [network] signal transduction	(2054 genes)	IEP

GO CC

GO:0005634 [list] [network] nucleus

(10305 genes)

ISM

GO MF

GO:0000976 [list] [network] transcription cis-regulatory region binding	(708 genes)	IDA
GO:0003700 [list] [network] DNA-binding transcription factor activity	(1576 genes)	IEA IMP ISS
GO:0005515 [list] [network] protein binding	(5066 genes)	IPI

KEGG

Protein

NP_001189562.1 NP_001325394.1 NP_565476.1

BLAST

NP_001189562.1 NP_001325394.1 NP_565476.1

Orthologous

[Ortholog page] GLK2 (ath) LOC4326363 (osa) LOC4340977 (osa) LOC7469566 (ppo) LOC11444987 (mtr) LOC18106803 (ppo) LOC25487700 (mtr) LOC100037604 (tae) LOC100775671 (gma) LOC100777595 (gma) LOC100790591 (gma) LOC100799248 (gma) LOC100873124 (tae) GLK1 (sly) GLK2 (sly) LOC103827922 (bra) LOC103828162 (bra) LOC103842594 (bra) LOC103848864 (bra) LOC112325786 (ppo) LOC123069433 (tae) LOC123077934 (tae) LOC123161005 (tae) LOC123168849 (tae) LOC123411544 (hvu) LOC123443300 (hvu)

Subcellular
localization
wolf

nucl 4, cyto 4, cyto_nucl 4	(predict for NP_001189562.1)
nucl 7, chlo 1, cyto 1, plas 1, cysk 1, cysk_plas 1, cyto_plas 1	(predict for NP_001325394.1)
cyto 4, nucl 3, plas 1, chlo 1, mito 1, cysk 1, chlo_mito 1, golg_plas 1, E.R._plas 1	(predict for NP_565476.1)

Subcellular
localization
TargetP

other 8	(predict for NP_001189562.1)
other 8	(predict for NP_001325394.1)
other 8	(predict for NP_565476.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00860	Porphyrin metabolism	2

Genes directly connected with GPRI1 on the network
coex z^*	Locus	Function^*	CoexViewer	Entrez Gene ID^*
7.4	GLK2	GOLDEN2-like 2	[detail]	834442
6.6	BBX15	B-box type zinc finger protein with CCT domain-containing protein	[detail]	839130
5.9	NCED4	nine-cis-epoxycarotenoid dioxygenase 4	[detail]	827655

Coexpressed
gene list

[Coexpressed gene list for GPRI1]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

263715_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

263715_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

263715_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	816579
Refseq ID (protein)	NP_001189562.1
	NP_001325394.1
	NP_565476.1

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