[][] ath   AT2G45190 Gene
functional annotation
Function   Plant-specific transcription factor YABBY family protein
GO BP
GO:0090706 [list] [network] specification of plant organ position  (1 genes)  IMP  
GO:0010450 [list] [network] inflorescence meristem growth  (2 genes)  IMP  
GO:0010158 [list] [network] abaxial cell fate specification  (8 genes)  IBA IGI  
GO:1902183 [list] [network] regulation of shoot apical meristem development  (10 genes)  IBA IMP  
GO:0010093 [list] [network] specification of floral organ identity  (13 genes)  IMP  
GO:0009944 [list] [network] polarity specification of adaxial/abaxial axis  (23 genes)  IBA IMP  
GO:0009933 [list] [network] meristem structural organization  (54 genes)  IMP  
GO:0045165 [list] [network] cell fate commitment  (58 genes)  IBA IMP  
GO:2000024 [list] [network] regulation of leaf development  (73 genes)  IBA IMP  
GO:0009909 [list] [network] regulation of flower development  (157 genes)  IMP  
GO:0010154 [list] [network] fruit development  (753 genes)  IBA IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA ISM TAS  
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1599 genes)  ISS  
GO:0003677 [list] [network] DNA binding  (2280 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_001323472.1  NP_566037.1 
BLAST NP_001323472.1  NP_566037.1 
Orthologous [Ortholog page] LOC542129 (zma)LOC542130 (zma)LOC542744 (zma)LOC4330130 (osa)LOC4349074 (osa)LOC7465527 (ppo)LOC7488885 (ppo)LOC11410996 (mtr)LOC25491643 (mtr)LOC100243667 (vvi)LOC100267708 (vvi)LOC100781267 (gma)LOC100786175 (gma)LOC100794423 (gma)FILA (gma)YABBY1a (sly)YABBY1b (sly)LOC103830131 (bra)LOC103858163 (bra)LOC103866196 (bra)
Subcellular
localization
wolf
nucl 6,  chlo 1,  cyto 1  (predict for NP_001323472.1)
nucl 9,  chlo 1,  cyto 1  (predict for NP_566037.1)
Subcellular
localization
TargetP
mito 5,  other 4  (predict for NP_001323472.1)
other 6,  chlo 4  (predict for NP_566037.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AFO on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
12.4 YAB3 Plant-specific transcription factor YABBY family protein [detail] 827914
6.8 HB25 homeobox protein 25 [detail] 836666
6.8 YAB2 Plant-specific transcription factor YABBY family protein [detail] 3766682
6.5 AT4G17810 C2H2 and C2HC zinc fingers superfamily protein [detail] 827503
6.2 YAB5 plant-specific transcription factor YABBY family protein [detail] 817199
6.0 TCP5 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5 [detail] 836218
4.6 AT5G10310 EPIDERMAL PATTERNING FACTOR-like protein [detail] 830895
Coexpressed
gene list
[Coexpressed gene list for AFO]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
245138_at
245138_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
245138_at
245138_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
245138_at
245138_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 819127    
Refseq ID (protein) NP_001323472.1 
NP_566037.1 


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