[←][→] ath   At3g07650 Gene
functional annotation
Function   CONSTANS-like 9    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0048579 [list] [network] negative regulation of long-day photoperiodism, flowering  (14 genes)  IMP  
GO:0007623 [list] [network] circadian rhythm  (123 genes)  IEP  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1656 genes)  TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA ISM  
GO MF
GO:0008270 [list] [network] zinc ion binding  (429 genes)  IEA  
GO:0000976 [list] [network] transcription cis-regulatory region binding  (708 genes)  IPI  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1576 genes)  ISS  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_001030659.1  NP_001118599.1  NP_187422.1  NP_974250.1 
BLAST NP_001030659.1  NP_001118599.1  NP_187422.1  NP_974250.1 
Orthologous [Ortholog page] BBX8 (ath)  LOC4330574 (osa)  LOC4340812 (osa)  LOC7458244 (ppo)  LOC7469344 (ppo)  LOC11415514 (mtr)  LOC11435974 (mtr)  LOC100783016 (gma)  LOC100787695 (gma)  LOC100796748 (gma)  LOC100800832 (gma)  LOC101250503 (sly)  LOC101257930 (sly)  LOC101267825 (sly)  LOC103249162 (bra)  LOC103849175 (bra)  LOC103854528 (bra)  LOC103859237 (bra)  LOC103874939 (bra)  LOC112326649 (ppo)  LOC123128245 (tae)  LOC123138077 (tae)  LOC123145345 (tae)  LOC123150352 (tae)  LOC123162779 (tae)  LOC123167272 (tae)  LOC123404271 (hvu)  LOC123413031 (hvu) 
Subcellular
localization
wolf
nucl 10  (predict for NP_001030659.1)
nucl 10  (predict for NP_001118599.1)
nucl 10  (predict for NP_187422.1)
nucl 10  (predict for NP_974250.1)
Subcellular
localization
TargetP
other 6  (predict for NP_001030659.1)
other 6  (predict for NP_001118599.1)
other 6  (predict for NP_187422.1)
other 6  (predict for NP_974250.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 5
Genes directly connected with COL9 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
16.1 COR27 cold regulated protein 27 [detail] 834301
14.4 BBX8 B-box type zinc finger protein with CCT domain-containing protein [detail] 834878
14.0 AT4G33980 uncharacterized protein [detail] 829544
12.6 AT1G17665 CA-responsive protein [detail] 838343
10.6 JMJD5 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [detail] 821629
10.6 TOC1 CCT motif -containing response regulator protein [detail] 836259
9.3 RVE2 Homeodomain-like superfamily protein [detail] 833700
9.0 AT1G07050 CCT motif family protein [detail] 837216
7.7 ELF3 hydroxyproline-rich glycoprotein family protein [detail] 817134
7.0 BOA Homeodomain-like superfamily protein [detail] 836076
5.1 AT2G40085 uncharacterized protein [detail] 2745588
Coexpressed
gene list		 [Coexpressed gene list for COL9]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
259244_at
259244_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
259244_at
259244_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
259244_at
259244_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 819956      
Refseq ID (protein) NP_001030659.1 
NP_001118599.1 
NP_187422.1 
NP_974250.1 


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