[←][→] ath   AT4G27470 Gene
functional annotation
Function   RING membrane-anchor 3  
GO BP
GO:0071712 [list] [network] ER-associated misfolded protein catabolic process  (13 genes)  IBA  
GO:0071456 [list] [network] cellular response to hypoxia  (238 genes)  HEP  
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (436 genes)  IBA  
GO:0016567 [list] [network] protein ubiquitination  (624 genes)  IEA  
GO CC
GO:0005789 [list] [network] endoplasmic reticulum membrane  (466 genes)  IEA  
GO:0005783 [list] [network] endoplasmic reticulum  (877 genes)  IDA  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0044390 [list] [network] ubiquitin-like protein conjugating enzyme binding  (52 genes)  IBA  
GO:0061630 [list] [network] ubiquitin protein ligase activity  (204 genes)  IBA  
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (434 genes)  IDA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
KEGG ath04141 [list] [network] Protein processing in endoplasmic reticulum (211 genes)
Protein NP_194477.2 
BLAST NP_194477.2 
Orthologous [Ortholog page] RMA1 (ath)  RMA2 (ath)  LOC4330106 (osa)  LOC4336483 (osa)  LOC7460826 (ppo)  LOC7477410 (ppo)  LOC25485936 (mtr)  LOC25487645 (mtr)  LOC25487651 (mtr)  LOC25493170 (mtr)  LOC25493171 (mtr)  LOC25502627 (mtr)  LOC100192071 (zma)  LOC100255559 (vvi)  LOC100257429 (vvi)  LOC100265502 (vvi)  LOC100286356 (zma)  LOC100779793 (gma)  LOC100780643 (gma)  LOC100782827 (gma)  LOC100785491 (gma)  LOC100786373 (gma)  LOC100807061 (gma)  LOC100807729 (gma)  LOC100816864 (gma)  LOC100817526 (gma)  LOC101243642 (sly)  LOC101247183 (sly)  LOC101248949 (sly)  LOC101253976 (sly)  LOC101254012 (sly)  LOC101262152 (sly)  MKB1 (sly)  LOC101264841 (sly)  LOC103627470 (zma)  LOC103834771 (bra)  LOC103846598 (bra)  LOC103861695 (bra)  LOC103861821 (bra)  LOC103867189 (bra)  LOC103867947 (bra) 
Subcellular
localization
wolf
nucl 4,  golg 3,  chlo 1,  cyto 1,  mito 1,  E.R. 1,  chlo_mito 1,  cyto_E.R. 1  (predict for NP_194477.2)
Subcellular
localization
TargetP
other 8  (predict for NP_194477.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 2
Genes directly connected with RMA3 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.1 AtATG18a Transducin/WD40 repeat-like superfamily protein [detail] 825452
6.9 AT2G38410 ENTH/VHS/GAT family protein [detail] 818422
6.5 AT5G14540 basic salivary proline-rich-like protein (DUF1421) [detail] 831305
6.1 AT3G60590 cytochrome P450 family protein [detail] 825230
6.0 J20 DNAJ-like 20 [detail] 827017
5.9 AT1G16840 hypothetical protein [detail] 838255
4.7 AT4G09560 Protease-associated (PA) RING/U-box zinc finger family protein [detail] 826540
Coexpressed
gene list		 [Coexpressed gene list for RMA3]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
253865_at
253865_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
253865_at
253865_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
253865_at
253865_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 828856      
Refseq ID (protein) NP_194477.2 


The preparation time of this page was 0.2 [sec].