[←][→] ath   At5g08130 Gene
functional annotation
Function   basic helix-loop-helix (bHLH) DNA-binding superfamily protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:1902448 [list] [network] positive regulation of shade avoidance  (4 genes)  IMP  
GO:0009742 [list] [network] brassinosteroid mediated signaling pathway  (58 genes)  IGI  
GO:0006351 [list] [network] DNA-templated transcription  (159 genes)  IEA IMP  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1656 genes)  TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA ISM  
GO MF
GO:0042802 [list] [network] identical protein binding  (404 genes)  IPI  
GO:0046983 [list] [network] protein dimerization activity  (421 genes)  IEA  
GO:0000976 [list] [network] transcription cis-regulatory region binding  (708 genes)  IPI  
GO:0003677 [list] [network] DNA binding  (1277 genes)  IDA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1576 genes)  IDA IEA ISS  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_001119190.1  NP_001190257.1  NP_001190258.1  NP_001190259.1  NP_001318507.1  NP_001318508.1  NP_001330723.1  NP_001330724.1 
BLAST NP_001119190.1  NP_001190257.1  NP_001190258.1  NP_001190259.1  NP_001318507.1  NP_001318508.1  NP_001330723.1  NP_001330724.1 
Orthologous [Ortholog page] BIM3 (ath)  BIM2 (ath)  LOC4345899 (osa)  LOC4347359 (osa)  LOC7453864 (ppo)  LOC7482242 (ppo)  LOC7483907 (ppo)  LOC7487119 (ppo)  LOC11428511 (mtr)  LOC11431634 (mtr)  LOC18097667 (ppo)  LOC18107365 (ppo)  LOC25493922 (mtr)  LOC100791730 (gma)  LOC100792653 (gma)  LOC100795416 (gma)  LOC100800999 (gma)  LOC100808016 (gma)  LOC100816055 (gma)  LOC101254588 (sly)  LOC101258066 (sly)  LOC101260613 (sly)  LOC101263596 (sly)  LOC101264225 (sly)  LOC103831309 (bra)  LOC103847129 (bra)  LOC103852546 (bra)  LOC103854916 (bra)  LOC103855759 (bra)  LOC123104068 (tae)  LOC123112292 (tae)  LOC123121815 (tae)  LOC123147839 (tae)  LOC123161900 (tae)  LOC123169467 (tae)  LOC123399101 (hvu)  LOC123411146 (hvu) 
Subcellular
localization
wolf
nucl 8,  chlo 1,  cyto 1,  plas 1,  cyto_plas 1  (predict for NP_001119190.1)
nucl 8,  chlo 1,  cyto 1,  plas 1,  cyto_plas 1  (predict for NP_001190257.1)
nucl 9  (predict for NP_001190258.1)
nucl 9  (predict for NP_001190259.1)
nucl 10  (predict for NP_001318507.1)
nucl 10  (predict for NP_001318508.1)
nucl 8,  chlo 1,  cyto 1,  plas 1,  cyto_plas 1  (predict for NP_001330723.1)
nucl 9  (predict for NP_001330724.1)
Subcellular
localization
TargetP
mito 5,  other 3  (predict for NP_001119190.1)
mito 5,  other 3  (predict for NP_001190257.1)
mito 4,  other 3  (predict for NP_001190258.1)
mito 4,  other 3  (predict for NP_001190259.1)
other 8  (predict for NP_001318507.1)
other 8  (predict for NP_001318508.1)
mito 5,  other 3  (predict for NP_001330723.1)
mito 4,  other 3  (predict for NP_001330724.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with BIM1 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
5.7 HB6 homeobox protein 6 [detail] 816775
5.2 BIM2 BES1-interacting Myc-like protein 2 [detail] 843233
5.2 PHYB phytochrome B [detail] 816394
4.7 BRG3 SBP (S-ribonuclease binding protein) family protein [detail] 820477
Coexpressed
gene list		 [Coexpressed gene list for BIM1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250569_at
250569_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250569_at
250569_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
250569_at
250569_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 830708      
Refseq ID (protein) NP_001119190.1 
NP_001190257.1 
NP_001190258.1 
NP_001190259.1 
NP_001318507.1 
NP_001318508.1 
NP_001330723.1 
NP_001330724.1 


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