| functional annotation |
| Function |
myb domain protein 3r-4 |
|
| GO BP |
|
GO:0009623 [list] [network] response to parasitic fungus
|
(2 genes)
|
IMP
|
 |
|
GO:1901181 [list] [network] negative regulation of cellular response to caffeine
|
(2 genes)
|
IMP
|
|
|
GO:0032465 [list] [network] regulation of cytokinesis
|
(6 genes)
|
IGI
IMP
|
|
|
GO:0032875 [list] [network] regulation of DNA endoreduplication
|
(35 genes)
|
IMP
|
|
|
GO:0009751 [list] [network] response to salicylic acid
|
(215 genes)
|
IEP
|
|
|
GO:0045893 [list] [network] positive regulation of transcription, DNA-templated
|
(495 genes)
|
IMP
|
|
|
GO:0009620 [list] [network] response to fungus
|
(595 genes)
|
IEP
|
|
|
GO:0006355 [list] [network] regulation of transcription, DNA-templated
|
(1984 genes)
|
IDA
TAS
|
|
|
| GO CC |
|
GO:0005634 [list] [network] nucleus
|
(10793 genes)
|
IEA
ISM
|
|
|
| GO MF |
|
GO:0003713 [list] [network] transcription coactivator activity
|
(36 genes)
|
IDA
|
|
|
GO:0043565 [list] [network] sequence-specific DNA binding
|
(796 genes)
|
IDA
|
|
|
GO:0044212 [list] [network] transcription regulatory region DNA binding
|
(871 genes)
|
IPI
|
|
|
GO:0003700 [list] [network] DNA-binding transcription factor activity
|
(1599 genes)
|
ISS
|
|
|
GO:0005515 [list] [network] protein binding
|
(4605 genes)
|
IPI
|
|
|
| KEGG |
|
|
| Protein |
NP_001318541.1
NP_001330337.1
NP_001330338.1
NP_001330339.1
NP_568249.1
|
| BLAST |
NP_001318541.1
NP_001330337.1
NP_001330338.1
NP_001330339.1
NP_568249.1
|
| Orthologous |
[Ortholog page]
PC-MYB1 (ath)
LOC4327192 (osa)
LOC4351856 (osa)
LOC7462940 (ppo)
LOC7471543 (ppo)
LOC25482254 (mtr)
LOC25490084 (mtr)
LOC100255911 (vvi)
LOC100255924 (vvi)
LOC100261001 (vvi)
LOC100502241 (zma)
LOC100786044 (gma)
LOC100803634 (gma)
LOC100811335 (gma)
LOC101244454 (sly)
LOC101259775 (sly)
LOC103630174 (zma)
LOC103834518 (bra)
LOC103850523 (bra)
LOC103855916 (bra)
LOC103862194 (bra)
|
Subcellular
localization
wolf |
|
nucl 10
|
(predict for NP_001318541.1)
|
|
nucl 10
|
(predict for NP_001330337.1)
|
|
nucl 10
|
(predict for NP_001330338.1)
|
|
nucl 10
|
(predict for NP_001330339.1)
|
|
nucl 10
|
(predict for NP_568249.1)
|
|
Subcellular
localization
TargetP |
|
other 5,
chlo 4
|
(predict for NP_001318541.1)
|
|
other 5,
chlo 4
|
(predict for NP_001330337.1)
|
|
other 5,
chlo 4
|
(predict for NP_001330338.1)
|
|
other 5,
chlo 4
|
(predict for NP_001330339.1)
|
|
other 5,
chlo 4
|
(predict for NP_568249.1)
|
|
| Gene coexpression |
Network*for
coexpressed
genes |
Genes directly connected with MYB3R-4 on the network
| coex z* |
Locus |
Function* |
Coexpression
detail |
Entrez Gene ID* |
| 12.1 |
AT1G72250 |
Di-glucose binding protein with Kinesin motor domain-containing protein |
[detail] |
843557 |
| 12.0 |
AT2G36200 |
P-loop containing nucleoside triphosphate hydrolases superfamily protein |
[detail] |
818192 |
| 11.9 |
ATK5 |
kinesin 5 |
[detail] |
825867 |
| 11.3 |
NP3 |
NPK1-related protein kinase 3 |
[detail] |
819774 |
| 11.1 |
CYCB3;1 |
cyclin b3;1 |
[detail] |
838202 |
| 9.1 |
AT5G02370 |
ATP binding microtubule motor family protein |
[detail] |
831740 |
| 7.7 |
BUB3.2 |
Transducin/WD40 repeat-like superfamily protein |
[detail] |
841414 |
| 6.4 |
IQD7 |
IQ-domain 7 |
[detail] |
838321 |
| 4.8 |
KP1 |
kinesin-like protein 1 |
[detail] |
823602 |
|
Coexpressed
gene list |
[Coexpressed gene list for MYB3R-4]
|
| Gene expression |
| All samples |
[Expression pattern for all samples]
|
AtGenExpress*
(Development) |
250386_at
X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.
|
AtGenExpress*
(Stress) |
250386_at
X axis is samples (pdf file), and Y axis is log2-expression.
|
AtGenExpress*
(Hormone) |
250386_at
X axis is samples (xls file), and Y axis is log-expression.
|
AT5G11510 Gene
