functional annotation |
Function |
myb domain protein 3r-4 |
Plant GARDEN Plant GARDEN JBrowse
|
GO BP |
GO:1901181 [list] [network] negative regulation of cellular response to caffeine
|
(2 genes)
|
IMP
|
|
GO:0032465 [list] [network] regulation of cytokinesis
|
(3 genes)
|
IGI
IMP
|
|
GO:0032875 [list] [network] regulation of DNA endoreduplication
|
(38 genes)
|
IMP
|
|
GO:0000910 [list] [network] cytokinesis
|
(150 genes)
|
IDA
|
|
GO:0045893 [list] [network] positive regulation of DNA-templated transcription
|
(272 genes)
|
IMP
|
|
GO:0009751 [list] [network] response to salicylic acid
|
(438 genes)
|
IEP
|
|
GO:0050832 [list] [network] defense response to fungus
|
(705 genes)
|
IMP
|
|
GO:0009620 [list] [network] response to fungus
|
(999 genes)
|
IEP
|
|
GO:0006355 [list] [network] regulation of DNA-templated transcription
|
(1656 genes)
|
IDA
TAS
|
|
|
GO CC |
|
GO MF |
GO:0001228 [list] [network] DNA-binding transcription activator activity, RNA polymerase II-specific
|
(8 genes)
|
IDA
|
|
GO:0000976 [list] [network] transcription cis-regulatory region binding
|
(708 genes)
|
IPI
|
|
GO:0043565 [list] [network] sequence-specific DNA binding
|
(890 genes)
|
IDA
|
|
GO:0003700 [list] [network] DNA-binding transcription factor activity
|
(1576 genes)
|
ISS
|
|
GO:0005515 [list] [network] protein binding
|
(5066 genes)
|
IPI
|
|
|
KEGG |
|
|
Protein |
NP_001318541.1
NP_001330337.1
NP_001330338.1
NP_001330339.1
NP_568249.1
|
BLAST |
NP_001318541.1
NP_001330337.1
NP_001330338.1
NP_001330339.1
NP_568249.1
|
Orthologous |
[Ortholog page]
PC-MYB1 (ath)
LOC4327192 (osa)
LOC4351856 (osa)
LOC7462940 (ppo)
LOC7471543 (ppo)
LOC25482254 (mtr)
LOC25490084 (mtr)
LOC100786044 (gma)
LOC100794559 (gma)
LOC100803634 (gma)
LOC100811335 (gma)
LOC100873109 (tae)
LOC101244454 (sly)
LOC101259775 (sly)
LOC103834518 (bra)
LOC103846712 (bra)
LOC103850523 (bra)
LOC103855916 (bra)
LOC103862194 (bra)
LOC123060787 (tae)
LOC123069352 (tae)
LOC123077867 (tae)
LOC123180756 (tae)
LOC123427682 (hvu)
LOC123443247 (hvu)
|
Subcellular localization wolf |
nucl 10
|
(predict for NP_001318541.1)
|
nucl 10
|
(predict for NP_001330337.1)
|
nucl 10
|
(predict for NP_001330338.1)
|
nucl 10
|
(predict for NP_001330339.1)
|
nucl 10
|
(predict for NP_568249.1)
|
|
Subcellular localization TargetP |
other 5,
chlo 4
|
(predict for NP_001318541.1)
|
other 5,
chlo 4
|
(predict for NP_001330337.1)
|
other 5,
chlo 4
|
(predict for NP_001330338.1)
|
other 5,
chlo 4
|
(predict for NP_001330339.1)
|
other 5,
chlo 4
|
(predict for NP_568249.1)
|
|
Gene coexpression |
Network*for coexpressed genes |
Genes directly connected with MYB3R-4 on the network
coex z* |
Locus |
Function* |
CoexViewer |
Entrez Gene ID* |
12.6 |
AT1G72250 |
Di-glucose binding protein with Kinesin motor domain-containing protein |
[detail] |
843557 |
11.8 |
AT2G36200 |
P-loop containing nucleoside triphosphate hydrolases superfamily protein |
[detail] |
818192 |
11.5 |
AT4G03100 |
Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein |
[detail] |
828092 |
11.1 |
NP3 |
NPK1-related protein kinase 3 |
[detail] |
819774 |
10.8 |
CYCB3;1 |
cyclin b3;1 |
[detail] |
838202 |
9.2 |
AT5G02370 |
ATP binding microtubule motor family protein |
[detail] |
831740 |
7.5 |
IQD7 |
IQ-domain 7 |
[detail] |
838321 |
6.3 |
AT5G66840 |
SAP domain-containing protein |
[detail] |
836818 |
|
Coexpressed gene list |
[Coexpressed gene list for MYB3R-4]
|
Gene expression |
All samples |
[Expression pattern for all samples]
|
AtGenExpress* (Development) |
250386_at
X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.
|
AtGenExpress* (Stress) |
250386_at
X axis is samples (pdf file), and Y axis is log2-expression.
|
AtGenExpress* (Hormone) |
250386_at
X axis is samples (xls file), and Y axis is log-expression.
|