[←][→] ath   At5g39660 Gene
functional annotation
Function   cycling DOF factor 2    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0048510 [list] [network] regulation of timing of transition from vegetative to reproductive phase  (43 genes)  IMP  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1656 genes)  TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0000976 [list] [network] transcription cis-regulatory region binding  (708 genes)  IPI  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1576 genes)  ISS  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_001318708.1  NP_568567.1  NP_851106.1 
BLAST NP_001318708.1  NP_568567.1  NP_851106.1 
Orthologous [Ortholog page] LOC778113 (gma)  LOC778120 (gma)  CDF3 (ath)  CDF1 (ath)  LOC4324267 (osa)  LOC4331765 (osa)  LOC4344326 (osa)  LOC4348585 (osa)  LOC7459189 (ppo)  LOC7463038 (ppo)  LOC7464583 (ppo)  LOC7489704 (ppo)  LOC7495982 (ppo)  LOC9272566 (osa)  LOC11409779 (mtr)  LOC11410541 (mtr)  LOC11412800 (mtr)  LOC11414470 (mtr)  LOC11414982 (mtr)  LOC11416079 (mtr)  LOC11427755 (mtr)  LOC11435622 (mtr)  LOC11445690 (mtr)  LOC18101447 (ppo)  LOC25490407 (mtr)  LOC25495811 (mtr)  LOC25495812 (mtr)  LOC100775201 (gma)  LOC100775675 (gma)  LOC100784308 (gma)  LOC100788246 (gma)  LOC100788247 (gma)  LOC100798021 (gma)  LOC100803454 (gma)  LOC100807731 (gma)  LOC100813315 (gma)  LOC100813787 (gma)  LOC100817354 (gma)  LOC101243956 (sly)  LOC101248009 (sly)  LOC101252243 (sly)  Dof22 (sly)  LOC101262001 (sly)  LOC102664782 (gma)  LOC102666857 (gma)  LOC103850147 (bra)  LOC103855006 (bra)  LOC103863905 (bra)  LOC103873236 (bra)  LOC103874677 (bra)  LOC123043647 (tae)  LOC123051520 (tae)  LOC123061029 (tae)  LOC123061111 (tae)  LOC123069617 (tae)  LOC123078102 (tae)  LOC123078183 (tae)  LOC123084774 (tae)  LOC123093309 (tae)  LOC123098577 (tae)  LOC123187442 (tae)  LOC123424683 (hvu)  LOC123443453 (hvu)  LOC123443531 (hvu)  LOC123449559 (hvu) 
Subcellular
localization
wolf
nucl 7,  cyto 1,  chlo 1,  mito 1,  chlo_mito 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_001318708.1)
nucl 7,  cyto 1,  chlo 1,  mito 1,  chlo_mito 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_568567.1)
nucl 7,  cyto 1,  chlo 1,  mito 1,  chlo_mito 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_851106.1)
Subcellular
localization
TargetP
other 7  (predict for NP_001318708.1)
other 7  (predict for NP_568567.1)
other 7  (predict for NP_851106.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 2
Genes directly connected with CDF2 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
12.3 RVE1 Homeodomain-like superfamily protein [detail] 831595
9.6 AT3G12320 uncharacterized protein [detail] 820411
8.3 AT2G41250 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein [detail] 818724
7.3 ASG1 ATP-dependent DNA helicase [detail] 816944
Coexpressed
gene list		 [Coexpressed gene list for CDF2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
249415_at
249415_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
249415_at
249415_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
249415_at
249415_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 833962      
Refseq ID (protein) NP_001318708.1 
NP_568567.1 
NP_851106.1 


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