[←][→] ath   At5g47390 Gene
functional annotation
Function   myb-like transcription factor family protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:2000469 [list] [network] negative regulation of peroxidase activity  (1 genes)  IMP  
GO:0000122 [list] [network] negative regulation of transcription by RNA polymerase II  (13 genes)  IMP  
GO:0030307 [list] [network] positive regulation of cell growth  (21 genes)  IMP  
GO:0010252 [list] [network] auxin homeostasis  (35 genes)  IMP  
GO:0009646 [list] [network] response to absence of light  (50 genes)  IEP  
GO:0048527 [list] [network] lateral root development  (128 genes)  IMP  
GO:0090697 [list] [network] post-embryonic plant organ morphogenesis  (128 genes)  IMP  
GO:0010150 [list] [network] leaf senescence  (195 genes)  IMP  
GO:0045892 [list] [network] negative regulation of DNA-templated transcription  (205 genes)  IDA NAS  
GO:0009723 [list] [network] response to ethylene  (241 genes)  IMP  
GO:0009733 [list] [network] response to auxin  (384 genes)  IMP  
GO:0048366 [list] [network] leaf development  (465 genes)  IMP  
GO:0009737 [list] [network] response to abscisic acid  (1086 genes)  IMP  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1656 genes)  TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA ISM  
GO MF
GO:0008270 [list] [network] zinc ion binding  (429 genes)  IEA  
GO:0000976 [list] [network] transcription cis-regulatory region binding  (708 genes)  IDA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1576 genes)  IDA ISS  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_199550.1 
BLAST NP_199550.1 
Orthologous [Ortholog page] MYB93 (gma)  MYB180 (gma)  LOC4349385 (osa)  LOC7471640 (ppo)  LOC11413435 (mtr)  LOC18094595 (ppo)  LOC101262741 (sly)  LOC103839529 (bra)  LOC103853804 (bra)  LOC103860911 (bra)  LOC103868158 (bra)  LOC123052457 (tae)  LOC123128511 (tae)  LOC123181685 (tae)  LOC123439464 (hvu) 
Subcellular
localization
wolf
nucl 7,  chlo 3  (predict for NP_199550.1)
Subcellular
localization
TargetP
chlo 6,  mito 5  (predict for NP_199550.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT5G47390 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
9.3 ATCTH Zinc finger C-x8-C-x5-C-x3-H type family protein [detail] 817131
9.0 AT5G60680 transcription initiation factor TFIID subunit (Protein of unknown function, DUF584) [detail] 836189
7.7 AT4G28240 Wound-responsive family protein [detail] 828939
7.7 AT2G38820 DNA-directed RNA polymerase subunit beta-beta protein, putative (DUF506) [detail] 818464
6.7 AT1G19000 Homeodomain-like superfamily protein [detail] 838481
6.1 AT1G03610 plant/protein (DUF789) [detail] 838961
5.6 AT1G71020 ARM repeat superfamily protein [detail] 843442
4.8 AT3G06330 RING/U-box superfamily protein [detail] 819807
Coexpressed
gene list		 [Coexpressed gene list for AT5G47390]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248795_at
248795_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248795_at
248795_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248795_at
248795_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 834786      
Refseq ID (protein) NP_199550.1 


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