[←][→] ath   AT5G57660 Gene
functional annotation
Function   CONSTANS-like 5  
GO BP
GO:0009909 [list] [network] regulation of flower development  (157 genes)  IBA  
GO:0006355 [list] [network] regulation of transcription, DNA-templated  (1984 genes)  TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA ISM  
GO MF
GO:0008270 [list] [network] zinc ion binding  (554 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1599 genes)  ISS  
KEGG
Protein NP_568863.1 
BLAST NP_568863.1 
Orthologous [Ortholog page] COL3 (ath)  COL4 (ath)  LOC4329950 (osa)  LOC4336288 (osa)  LOC7461603 (ppo)  LOC7465448 (ppo)  LOC7489168 (ppo)  LOC11425462 (mtr)  LOC11431452 (mtr)  LOC11431470 (mtr)  LOC100191137 (sly)  LOC100244502 (vvi)  LOC100246796 (vvi)  LOC100281289 (zma)  COL10 (gma)  LOC100794431 (gma)  LOC100802376 (gma)  LOC100804201 (gma)  COL8 (gma)  LOC101254368 (sly)  LOC101268413 (sly)  LOC103249145 (bra)  LOC103633651 (zma)  LOC103641806 (zma)  LOC103646270 (zma)  LOC103837073 (bra)  LOC103845200 (bra)  LOC103864587 (bra)  LOC103874359 (bra)  LOC109945560 (zma) 
Subcellular
localization
wolf
chlo 4,  cyto 4,  nucl 1,  mito 1,  extr 1,  cysk_nucl 1,  nucl_plas 1  (predict for NP_568863.1)
Subcellular
localization
TargetP
other 4  (predict for NP_568863.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 4
Genes directly connected with COL5 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.8 AT5G06980 hypothetical protein [detail] 830589
9.0 BBX28 B-box type zinc finger family protein [detail] 828839
8.9 AT5G64170 dentin sialophosphoprotein-like protein [detail] 836538
7.8 PIL6 phytochrome interacting factor 3-like 6 [detail] 825075
6.3 OBP4 OBF binding protein 4 [detail] 836206
Coexpressed
gene list		 [Coexpressed gene list for COL5]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
247921_at
247921_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
247921_at
247921_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
247921_at
247921_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835872      
Refseq ID (protein) NP_568863.1 


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