ATTED-II : GeneID search result

[←][→] ath At5g62470 Gene

functional annotation

Function

myb domain protein 96

GO BP

GO:1904278 [list] [network] positive regulation of wax biosynthetic process	(7 genes)	IMP
GO:2000033 [list] [network] regulation of seed dormancy process	(14 genes)	IMP
GO:0010115 [list] [network] regulation of abscisic acid biosynthetic process	(19 genes)	IMP
GO:0010025 [list] [network] wax biosynthetic process	(30 genes)	IMP
GO:0009789 [list] [network] positive regulation of abscisic acid-activated signaling pathway	(53 genes)	IDA
GO:0009787 [list] [network] regulation of abscisic acid-activated signaling pathway	(134 genes)	IMP
GO:0045893 [list] [network] positive regulation of DNA-templated transcription	(272 genes)	IMP
GO:0009409 [list] [network] response to cold	(472 genes)	IMP
GO:0009414 [list] [network] response to water deprivation	(1006 genes)	IMP
GO:0006355 [list] [network] regulation of DNA-templated transcription	(1656 genes)	TAS
GO:0010468 [list] [network] regulation of gene expression	(2177 genes)	IMP

GO CC

GO:0005634 [list] [network] nucleus

(10305 genes)

IDA ISM

GO MF

GO:0043565 [list] [network] sequence-specific DNA binding	(890 genes)	IDA
GO:0003700 [list] [network] DNA-binding transcription factor activity	(1576 genes)	ISS
GO:0005515 [list] [network] protein binding	(5066 genes)	IPI

KEGG

Protein

NP_201053.2 NP_851248.1

BLAST

NP_201053.2 NP_851248.1

Orthologous

[Ortholog page] THM6 (sly) LOC778078 (gma) MYB60 (gma) MYB53 (gma) LOC780543 (gma) MYB30 (ath) MYB94 (ath) MYB60 (ath) MYB31 (ath) LOC4335671 (osa) LOC4343245 (osa) LOC4347052 (osa) LOC4349657 (osa) LOC4350727 (osa) LOC4351379 (osa) LOC7463057 (ppo) LOC7489712 (ppo) LOC7495972 (ppo) LOC9272734 (osa) LOC11408513 (mtr) LOC11409960 (mtr) LOC11412291 (mtr) LOC11428992 (mtr) LOC18108277 (ppo) LOC25481134 (mtr) LOC100794319 (gma) LOC100799402 (gma) LOC100802204 (gma) MYBJ2 (gma) LOC100812460 (gma) LOC100817854 (gma) LOC101253245 (sly) LOC101253907 (sly) LOC101264168 (sly) LOC101267793 (sly) LOC103830692 (bra) LOC103831932 (bra) LOC103836374 (bra) LOC103837037 (bra) LOC103837414 (bra) LOC103852915 (bra) LOC103854178 (bra) LOC103855009 (bra) LOC103871622 (bra) LOC103874683 (bra) LOC103875122 (bra) LOC107280380 (osa) LOC123082089 (tae) LOC123082579 (tae) LOC123094682 (tae) LOC123099745 (tae) LOC123107105 (tae) LOC123116234 (tae) LOC123117853 (tae) LOC123121653 (tae) LOC123126268 (tae) LOC123395589 (hvu) LOC123399622 (hvu) LOC123446230 (hvu)

Subcellular
localization
wolf

nucl 9, cyto 1, cysk 1	(predict for NP_201053.2)
nucl 9, cyto 1, cysk 1	(predict for NP_851248.1)

Subcellular
localization
TargetP

other 8	(predict for NP_201053.2)
other 8	(predict for NP_851248.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath02010	ABC transporters	4
ath00062	Fatty acid elongation	3
ath04626	Plant-pathogen interaction	3

Genes directly connected with MYB96 on the network
coex z^*	Locus	Function^*	CoexViewer	Entrez Gene ID^*
9.6	MYB94	myb domain protein 94	[detail]	823914
8.8	KCS3	3-ketoacyl-CoA synthase 3	[detail]	837286
7.1	ABCG11	white-brown complex-like protein	[detail]	838363
6.4	AT1G64380	Integrase-type DNA-binding superfamily protein	[detail]	842745
6.1	AT3G54200	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[detail]	824587

Coexpressed
gene list

[Coexpressed gene list for MYB96]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

247455_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

247455_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

247455_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	836367
Refseq ID (protein)	NP_201053.2
Refseq ID (protein)	NP_851248.1

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