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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-e.2   ATHAL3B   Flavoprotein 
 ath-u.5   ATHAL3B   Flavoprotein 
 ath-r.7   ATHAL3B   Flavoprotein 
 ath-u.5   HAL3A   HAL3-like protein A 
 bra-r.6   103869618   phosphopantothenoylcysteine decarboxylase 
 bra-r.6   103859738   phosphopantothenoylcysteine decarboxylase 
 bra-r.6   103838873   phosphopantothenoylcysteine decarboxylase 
 bna-r.1   111198652   phosphopantothenoylcysteine decarboxylase-like 
 bna-r.1   106395455   phosphopantothenoylcysteine decarboxylase-like 
 bna-r.1   106382678   phosphopantothenoylcysteine decarboxylase 
 ghi-r.1   107940100   probable phosphopantothenoylcysteine decarboxylase 
 ghi-r.1   107960419   phosphopantothenoylcysteine decarboxylase 
 ghi-r.1   107902642   phosphopantothenoylcysteine decarboxylase 
 cit-r.1   102616884   phosphopantothenoylcysteine decarboxylase-like 
 gma-u.5   100778368   phosphopantothenoylcysteine decarboxylase-like 
 vvi-u.5   100246682   phosphopantothenoylcysteine decarboxylase 
 ppo-u.5   7454680   probable phosphopantothenoylcysteine decarboxylase 
 mtr-u.5   11446329   phosphopantothenoylcysteine decarboxylase 
 sly-u.5   101268263   probable phosphopantothenoylcysteine decarboxylase 
 sly-u.5   101260558   phosphopantothenoylcysteine decarboxylase 
 sot-r.1   102603925   phosphopantothenoylcysteine decarboxylase-like 
 nta-r.1   107818426   phosphopantothenoylcysteine decarboxylase HAL3 
 nta-r.1   107808102   phosphopantothenoylcysteine decarboxylase HAL3a 
 nta-r.1   107762248   phosphopantothenoylcysteine decarboxylase HAL3 
 osa-u.5   4340408   phosphopantothenoylcysteine decarboxylase-like 
 zma-u.5   100194295   putative phosphopantothenoylcysteine decarboxylase 
 zma-u.5   100192815   phosphopantothenoylcysteine decarboxylase 
 tae-r.2   123150633   phosphopantothenoylcysteine decarboxylase 
 hvu-r.1   123407866   phosphopantothenoylcysteine decarboxylase-like 
 sbi-r.1   8070737   phosphopantothenoylcysteine decarboxylase 
 bdi-r.1   100835817   phosphopantothenoylcysteine decarboxylase 
 cre-r.1   CHLRE_10g423450v5   uncharacterized protein 

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Top 50 coexpressed genes to ATHAL3B (ath-e.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to ATHAL3B (ath-e.2 coexpression data)

CoexMap"2745818"


athATHAL3B | Entrez gene ID : 2745818      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 3 3 3 1 1 1 1 1 2 1 3 1 2 1 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath00770 [list] [network] Pantothenate and CoA biosynthesis (34 genes)
ath01240 [list] [network] Biosynthesis of cofactors (237 genes)
GO BP
GO:0015937 [list] [network] coenzyme A biosynthetic process  (8 genes)  IMP  
GO:0042538 [list] [network] hyperosmotic salinity response  (57 genes)  IEP  
GO CC
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
GO:0004633 [list] [network] phosphopantothenoylcysteine decarboxylase activity  (2 genes)  IGI  
GO:0010181 [list] [network] FMN binding  (17 genes)  ISS  
Protein NP_973994.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  nucl 3,  cyto_pero 3  (predict for NP_973994.1)
Subcellular
localization
TargetP
other 4  (predict for NP_973994.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-e.2
for
ATHAL3B
ath-u.5
for
ATHAL3B
ath-r.7
for
ATHAL3B
ath-u.5
for
HAL3A
bra-r.6
for
103869618
bra-r.6
for
103859738
bra-r.6
for
103838873
bna-r.1
for
111198652
bna-r.1
for
106395455
bna-r.1
for
106382678
ghi-r.1
for
107940100
ghi-r.1
for
107960419
ghi-r.1
for
107902642
cit-r.1
for
102616884
gma-u.5
for
100778368
vvi-u.5
for
100246682
ppo-u.5
for
7454680
mtr-u.5
for
11446329
sly-u.5
for
101268263
sly-u.5
for
101260558
sot-r.1
for
102603925
nta-r.1
for
107818426
nta-r.1
for
107808102
nta-r.1
for
107762248
osa-u.5
for
4340408
zma-u.5
for
100194295
zma-u.5
for
100192815
tae-r.2
for
123150633
hvu-r.1
for
123407866
sbi-r.1
for
8070737
bdi-r.1
for
100835817
cre-r.1
for
CHLRE_10g423450v5


Ortholog ID: 3460
Species ath ath bra bra bra bna bna bna ghi ghi ghi cit gma gma vvi ppo mtr sly sly sot nta nta osa zma zma tae tae hvu sbi bdi cre
Symbol ATHAL3B HAL3A LOC103869618 LOC103859738 LOC103838873 LOC106395455 LOC106382678 LOC106389058 LOC107940100 LOC107960419 LOC107938923 LOC102616884 LOC100778368 HAL3A LOC100246682 LOC7454680 LOC11446329 LOC101268263 LOC101260558 LOC102603925 LOC107808102 LOC107762248 LOC4340408 LOC100194295 LOC100192815 LOC123150633 LOC123167275 LOC123407866 LOC8070737 LOC100835817 CHLRE_10g423450v5
Function* Flavoprotein HAL3-like protein A phosphopantothenoylcysteine decarboxylase phosphopantothenoylcysteine decarboxylase phosphopantothenoylcysteine decarboxylase phosphopantothenoylcysteine decarboxylase-like phosphopantothenoylcysteine decarboxylase phosphopantothenoylcysteine decarboxylase probable phosphopantothenoylcysteine decarboxylase phosphopantothenoylcysteine decarboxylase probable phosphopantothenoylcysteine decarboxylase phosphopantothenoylcysteine decarboxylase-like phosphopantothenoylcysteine decarboxylase-like Phosphopantothenoylcysteine decarboxylase HAL3a phosphopantothenoylcysteine decarboxylase probable phosphopantothenoylcysteine decarboxylase phosphopantothenoylcysteine decarboxylase probable phosphopantothenoylcysteine decarboxylase phosphopantothenoylcysteine decarboxylase phosphopantothenoylcysteine decarboxylase-like phosphopantothenoylcysteine decarboxylase HAL3a phosphopantothenoylcysteine decarboxylase HAL3 phosphopantothenoylcysteine decarboxylase-like putative phosphopantothenoylcysteine decarboxylase phosphopantothenoylcysteine decarboxylase phosphopantothenoylcysteine decarboxylase phosphopantothenoylcysteine decarboxylase phosphopantothenoylcysteine decarboxylase-like phosphopantothenoylcysteine decarboxylase phosphopantothenoylcysteine decarboxylase uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00770 Pantothenate and CoA biosynthesis 5
bna01240 Biosynthesis of cofactors 5
bna00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00770 Pantothenate and CoA biosynthesis 5
bna01240 Biosynthesis of cofactors 5
bna00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00770 Pantothenate and CoA biosynthesis 5
bna01240 Biosynthesis of cofactors 5
bna00230 Purine metabolism 2
bna00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00770 Pantothenate and CoA biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
ghi00460 Cyanoamino acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi00770 Pantothenate and CoA biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00770 Pantothenate and CoA biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
ghi00460 Cyanoamino acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00710 Carbon fixation by Calvin cycle 3
cit01200 Carbon metabolism 3
cit00010 Glycolysis / Gluconeogenesis 2
cit01230 Biosynthesis of amino acids 2
cit00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03022 Basal transcription factors 4
gma03420 Nucleotide excision repair 4
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 3
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01240 Biosynthesis of cofactors 2
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
ppo03082 ATP-dependent chromatin remodeling 2
ppo03030 DNA replication 2
ppo03410 Base excision repair 2
ppo03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03030 DNA replication 2
sly03410 Base excision repair 2
sly03420 Nucleotide excision repair 2
sly03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00510 N-Glycan biosynthesis 2
sly00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00770 Pantothenate and CoA biosynthesis 4
nta01240 Biosynthesis of cofactors 4
nta00220 Arginine biosynthesis 2
nta00250 Alanine, aspartate and glutamate metabolism 2
nta00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 3
osa04130 SNARE interactions in vesicular transport 2
osa04814 Motor proteins 2
osa04120 Ubiquitin mediated proteolysis 2
osa04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 3
zma04075 Plant hormone signal transduction 2
zma00770 Pantothenate and CoA biosynthesis 2
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00770 Pantothenate and CoA biosynthesis 2
zma01240 Biosynthesis of cofactors 2
zma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00770 Pantothenate and CoA biosynthesis 3
tae01240 Biosynthesis of cofactors 3
tae04145 Phagosome 3
tae04517 IgSF CAM signaling 3
tae04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00770 Pantothenate and CoA biosynthesis 3
tae01240 Biosynthesis of cofactors 3
tae03008 Ribosome biogenesis in eukaryotes 2
tae03083 Polycomb repressive complex 2
tae04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00600 Sphingolipid metabolism 2
cre04382 Cornified envelope formation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 2745818 821327 103869618 103859738 103838873 106395455 106382678 106389058 107940100 107960419 107938923 102616884 100778368 100499989 100246682 7454680 11446329 101268263 101260558 102603925 107808102 107762248 4340408 100194295 100192815 123150633 123167275 123407866 8070737 100835817 5728228
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