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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-e.2   AT3G27290   RNI-like superfamily protein 
 ath-u.5   AT3G27290   RNI-like superfamily protein 
 ath-r.7   AT3G27290   RNI-like superfamily protein 
 ath-m.9   AT3G27290   RNI-like superfamily protein 
 ath-m.4.bio   AT3G27290   RNI-like superfamily protein 
 ath-m.4.hor   AT3G27290   RNI-like superfamily protein 
 ath-m.4.lig   AT3G27290   RNI-like superfamily protein 
 ath-m.4.str   AT3G27290   RNI-like superfamily protein 
 ath-m.4.tis   AT3G27290   RNI-like superfamily protein 
 ath-u.5   AT3G26000   Ribonuclease inhibitor 
 bra-r.6   103854391   F-box protein SKIP14 
 bra-r.6   103839348   F-box protein SKIP14 
 bra-r.6   103875330   F-box protein SKIP14 
 bna-r.1   106381994   F-box protein SKIP14-like 
 bna-r.1   106401351   F-box protein SKIP14 
 bna-r.1   106412405   F-box protein At3g27290 
 ghi-r.1   107899695   F-box protein SKIP14 
 ghi-r.1   107898640   F-box protein SKIP14 
 ghi-r.1   107926344   F-box protein SKIP14 
 cit-r.1   102609065   F-box protein SKIP14 
 cit-r.1   102613392   F-box protein SKIP14 
 gma-u.5   100807460   F-box protein SKIP14 
 gma-u.5   100781553   F-box protein SKIP14 
 gma-u.5   100778863   F-box protein SKIP14 
 vvi-u.5   100255977   F-box protein SKIP14 
 vvi-u.5   100266542   F-box protein SKIP14 
 ppo-u.5   7467684   F-box protein SKIP14 
 ppo-u.5   7477047   F-box protein SKIP14 
 mtr-u.5   25501704   F-box protein SKIP14 
 sly-u.5   101254475   F-box family protein 
 sly-u.5   101251948   F-box protein SKIP14 
 sly-u.5   101249223   F-box protein SKIP14 
 sot-r.1   102598755   F-box protein SKIP14-like 
 sot-r.1   102594040   F-box protein SKIP14-like 
 sot-r.1   102596264   F-box protein SKIP14 
 nta-r.1   107827802   F-box protein SKIP14-like 
 nta-r.1   107775308   F-box protein SKIP14-like 
 nta-r.1   107831533   F-box protein SKIP14 
 osa-u.5   4336212   F-box protein SKIP14 
 osa-u.5   9268707   F-box protein SKIP14-like 
 zma-u.5   100382612   uncharacterized LOC100382612 
 zma-u.5   100193239   uncharacterized LOC100193239 
 tae-r.2   123189574   uncharacterized LOC123189574 
 tae-r.2   123053695   uncharacterized LOC123053695 
 tae-r.2   123045811   F-box protein SKIP14 
 hvu-r.1   123427052   uncharacterized LOC123427052 
 sbi-r.1   8073685   F-box protein SKIP14 
 bdi-r.1   100828954   F-box protein SKIP14 

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Top 50 coexpressed genes to AT3G27290 (ath-e.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G27290 (ath-e.2 coexpression data)

CoexMap"822348"


athAT3G27290 | Entrez gene ID : 822348      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 10 3 3 3 2 3 2 2 1 3 3 3 2 2 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_566814.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto_nucl 4,  cyto 4  (predict for NP_566814.1)
Subcellular
localization
TargetP
other 8  (predict for NP_566814.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-e.2
for
AT3G27290
ath-u.5
for
AT3G27290
ath-r.7
for
AT3G27290
ath-m.9
for
AT3G27290
ath-m.4.bio
for
AT3G27290
ath-m.4.hor
for
AT3G27290
ath-m.4.lig
for
AT3G27290
ath-m.4.str
for
AT3G27290
ath-m.4.tis
for
AT3G27290
ath-u.5
for
AT3G26000
bra-r.6
for
103854391
bra-r.6
for
103839348
bra-r.6
for
103875330
bna-r.1
for
106381994
bna-r.1
for
106401351
bna-r.1
for
106412405
ghi-r.1
for
107899695
ghi-r.1
for
107898640
ghi-r.1
for
107926344
cit-r.1
for
102609065
cit-r.1
for
102613392
gma-u.5
for
100807460
gma-u.5
for
100781553
gma-u.5
for
100778863
vvi-u.5
for
100255977
vvi-u.5
for
100266542
ppo-u.5
for
7467684
ppo-u.5
for
7477047
mtr-u.5
for
25501704
sly-u.5
for
101254475
sly-u.5
for
101251948
sly-u.5
for
101249223
sot-r.1
for
102598755
sot-r.1
for
102594040
sot-r.1
for
102596264
nta-r.1
for
107827802
nta-r.1
for
107775308
nta-r.1
for
107831533
osa-u.5
for
4336212
osa-u.5
for
9268707
zma-u.5
for
100382612
zma-u.5
for
100193239
tae-r.2
for
123189574
tae-r.2
for
123053695
tae-r.2
for
123045811
hvu-r.1
for
123427052
sbi-r.1
for
8073685
bdi-r.1
for
100828954


Ortholog ID: 2477
Species ath ath bra bra bra bna bna bna ghi ghi ghi cit cit gma gma gma vvi vvi ppo ppo mtr sly sly sly sot sot sot nta nta nta osa osa zma zma tae tae tae hvu sbi bdi
Symbol AT3G27290 AT3G26000 LOC103854391 LOC103875330 LOC103836987 LOC106415874 LOC111203343 LOC106392338 LOC107898640 LOC107946260 LOC107954714 LOC102609065 LOC102613392 LOC100807460 LOC100778863 LOC100781716 LOC100255977 LOC100266542 LOC7467684 LOC7477047 LOC25501704 LOC101254475 LOC101251948 LOC101249223 LOC102598755 LOC102594040 LOC102596264 LOC107827802 LOC107775308 LOC107793431 LOC4336212 LOC9268707 LOC100382612 LOC100193239 LOC123189574 LOC123053695 LOC123045811 LOC123427052 LOC8073685 LOC100828954
Function* RNI-like superfamily protein Ribonuclease inhibitor F-box protein SKIP14 F-box protein SKIP14 F-box protein At3g27290 F-box protein SKIP14 F-box protein SKIP14-like F-box protein At3g27290-like F-box protein SKIP14 F-box protein SKIP14 F-box protein SKIP14 F-box protein SKIP14 F-box protein SKIP14 F-box protein SKIP14 F-box protein SKIP14 F-box protein SKIP14 F-box protein SKIP14 F-box protein SKIP14 F-box protein SKIP14 F-box protein SKIP14 F-box protein SKIP14 F-box family protein F-box protein SKIP14 F-box protein SKIP14 F-box protein SKIP14-like F-box protein SKIP14-like F-box protein SKIP14 F-box protein SKIP14-like F-box protein SKIP14-like F-box protein SKIP14 F-box protein SKIP14 F-box protein SKIP14-like uncharacterized LOC100382612 uncharacterized LOC100193239 uncharacterized LOC123189574 uncharacterized LOC123053695 F-box protein SKIP14 uncharacterized LOC123427052 F-box protein SKIP14 F-box protein SKIP14
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 3
cit04075 Plant hormone signal transduction 2
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03015 mRNA surveillance pathway 2
vvi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03015 mRNA surveillance pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 3
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00564 Glycerophospholipid metabolism 2
bdi04146 Peroxisome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 822348 822197 103854391 103875330 103836987 106415874 111203343 106392338 107898640 107946260 107954714 102609065 102613392 100807460 100778863 100781716 100255977 100266542 7467684 7477047 25501704 101254475 101251948 101249223 102598755 102594040 102596264 107827802 107775308 107793431 4336212 9268707 100382612 100193239 123189574 123053695 123045811 123427052 8073685 100828954
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