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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100807460   F-box protein SKIP14 
 gma-r.7   100807460   F-box protein SKIP14 
 gma-m.5   100807460   F-box protein SKIP14 
 gma-u.5   100781716   F-box protein SKIP14 
 gma-u.5   100778863   F-box protein SKIP14 
 gma-u.5   100781553   F-box protein SKIP14 
 mtr-u.5   25501704   F-box protein SKIP14 
 ppo-u.5   7477047   F-box protein SKIP14 
 ppo-u.5   7467684   F-box protein SKIP14 
 ath-u.5   AT3G26000   Ribonuclease inhibitor 
 ath-u.5   AT3G27290   RNI-like superfamily protein 
 bra-r.6   117130603   F-box protein SKIP14-like 
 bra-r.6   103836987   F-box protein At3g27290 
 bra-r.6   103839348   F-box protein SKIP14 
 vvi-u.5   100266542   F-box protein SKIP14 
 vvi-u.5   100255977   F-box protein SKIP14 
 ghi-r.1   107954714   F-box protein SKIP14 
 ghi-r.1   107898640   F-box protein SKIP14 
 ghi-r.1   107899695   F-box protein SKIP14 
 bna-r.1   106381994   F-box protein SKIP14-like 
 bna-r.1   106401351   F-box protein SKIP14 
 bna-r.1   106412405   F-box protein At3g27290 
 cit-r.1   102609065   F-box protein SKIP14 
 cit-r.1   102613392   F-box protein SKIP14 
 sly-u.5   101254475   F-box family protein 
 sly-u.5   101251948   F-box protein SKIP14 
 sly-u.5   101249223   F-box protein SKIP14 
 sot-r.1   102598755   F-box protein SKIP14-like 
 sot-r.1   102594040   F-box protein SKIP14-like 
 sot-r.1   102596264   F-box protein SKIP14 
 nta-r.1   107827802   F-box protein SKIP14-like 
 nta-r.1   107775308   F-box protein SKIP14-like 
 nta-r.1   107831533   F-box protein SKIP14 
 osa-u.5   9268707   F-box protein SKIP14-like 
 osa-u.5   4336212   F-box protein SKIP14 
 zma-u.5   100193239   uncharacterized LOC100193239 
 zma-u.5   100382612   uncharacterized LOC100382612 
 tae-r.2   123045811   F-box protein SKIP14 
 tae-r.2   123053695   uncharacterized LOC123053695 
 tae-r.2   123189574   uncharacterized LOC123189574 
 hvu-r.1   123427052   uncharacterized LOC123427052 
 sbi-r.1   8073685   F-box protein SKIP14 
 bdi-r.1   100828954   F-box protein SKIP14 

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Top 50 coexpressed genes to 100807460 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100807460 (gma-u.5 coexpression data)

CoexMap"100807460"


gmaLOC100807460 | Entrez gene ID : 100807460      
Species gma mtr ppo ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 6 1 2 2 3 2 3 3 2 3 3 3 2 2 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005737 [list] [network] cytoplasm  (9233 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (7243 genes)  IEA  
Protein XP_003532712.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 1,  mito 1,  cysk 1,  chlo 1,  plas 1,  pero 1,  cyto_mito 1,  cyto_E.R. 1  (predict for XP_003532712.1)
Subcellular
localization
TargetP
other 7,  chlo 3  (predict for XP_003532712.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100807460
gma-r.7
for
100807460
gma-m.5
for
100807460
gma-u.5
for
100781716
gma-u.5
for
100778863
gma-u.5
for
100781553
mtr-u.5
for
25501704
ppo-u.5
for
7477047
ppo-u.5
for
7467684
ath-u.5
for
AT3G26000
ath-u.5
for
AT3G27290
bra-r.6
for
117130603
bra-r.6
for
103836987
bra-r.6
for
103839348
vvi-u.5
for
100266542
vvi-u.5
for
100255977
ghi-r.1
for
107954714
ghi-r.1
for
107898640
ghi-r.1
for
107899695
bna-r.1
for
106381994
bna-r.1
for
106401351
bna-r.1
for
106412405
cit-r.1
for
102609065
cit-r.1
for
102613392
sly-u.5
for
101254475
sly-u.5
for
101251948
sly-u.5
for
101249223
sot-r.1
for
102598755
sot-r.1
for
102594040
sot-r.1
for
102596264
nta-r.1
for
107827802
nta-r.1
for
107775308
nta-r.1
for
107831533
osa-u.5
for
9268707
osa-u.5
for
4336212
zma-u.5
for
100193239
zma-u.5
for
100382612
tae-r.2
for
123045811
tae-r.2
for
123053695
tae-r.2
for
123189574
hvu-r.1
for
123427052
sbi-r.1
for
8073685
bdi-r.1
for
100828954


Ortholog ID: 2477
Species gma gma gma mtr ppo ppo ath ath bra bra bra vvi vvi ghi ghi ghi bna bna bna cit cit sly sly sly sot sot sot nta nta nta osa osa zma zma tae tae tae hvu sbi bdi
Symbol LOC100807460 LOC100781716 LOC100778863 LOC25501704 LOC7477047 LOC7467684 AT3G26000 AT3G27290 LOC103836987 LOC103854391 LOC103875330 LOC100266542 LOC100255977 LOC107954714 LOC107898640 LOC107946260 LOC106415874 LOC111203343 LOC106392338 LOC102609065 LOC102613392 LOC101254475 LOC101251948 LOC101249223 LOC102598755 LOC102594040 LOC102596264 LOC107827802 LOC107775308 LOC107793431 LOC9268707 LOC4336212 LOC100193239 LOC100382612 LOC123045811 LOC123053695 LOC123189574 LOC123427052 LOC8073685 LOC100828954
Function* F-box protein SKIP14 F-box protein SKIP14 F-box protein SKIP14 F-box protein SKIP14 F-box protein SKIP14 F-box protein SKIP14 Ribonuclease inhibitor RNI-like superfamily protein F-box protein At3g27290 F-box protein SKIP14 F-box protein SKIP14 F-box protein SKIP14 F-box protein SKIP14 F-box protein SKIP14 F-box protein SKIP14 F-box protein SKIP14 F-box protein SKIP14 F-box protein SKIP14-like F-box protein At3g27290-like F-box protein SKIP14 F-box protein SKIP14 F-box family protein F-box protein SKIP14 F-box protein SKIP14 F-box protein SKIP14-like F-box protein SKIP14-like F-box protein SKIP14 F-box protein SKIP14-like F-box protein SKIP14-like F-box protein SKIP14 F-box protein SKIP14-like F-box protein SKIP14 uncharacterized LOC100193239 uncharacterized LOC100382612 F-box protein SKIP14 uncharacterized LOC123053695 uncharacterized LOC123189574 uncharacterized LOC123427052 F-box protein SKIP14 F-box protein SKIP14
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03015 mRNA surveillance pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03015 mRNA surveillance pathway 2
vvi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 3
cit04075 Plant hormone signal transduction 2
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 3
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00564 Glycerophospholipid metabolism 2
bdi04146 Peroxisome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100807460 100781716 100778863 25501704 7477047 7467684 822197 822348 103836987 103854391 103875330 100266542 100255977 107954714 107898640 107946260 106415874 111203343 106392338 102609065 102613392 101254475 101251948 101249223 102598755 102594040 102596264 107827802 107775308 107793431 9268707 4336212 100193239 100382612 123045811 123053695 123189574 123427052 8073685 100828954
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