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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-e.2  AT4G12710  ARM repeat superfamily protein 
 ath-u.5  AT4G12710  ARM repeat superfamily protein 
 ath-r.7  AT4G12710  ARM repeat superfamily protein 
 ghi-r.1  107952835  U-box domain-containing protein 15 
 ghi-r.1  107954700  U-box domain-containing protein 15 
 cit-r.1  102608568  U-box domain-containing protein 3 
 gma-u.5  100782472  U-box domain-containing protein 15 
 gma-u.5  100785760  U-box domain-containing protein 15 
 vvi-u.5  100261296  U-box domain-containing protein 3 
 ppo-u.5  7469341  U-box domain-containing protein 15 
 mtr-u.5  11408569  U-box domain-containing protein 15 
 sly-u.5  101265841  U-box domain-containing protein 3 
 sot-r.1  102606131  U-box domain-containing protein 15 
 nta-r.1  107814322  uncharacterized LOC107814322 
 nta-r.1  107825186  uncharacterized LOC107825186 

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Top 50 coexpressed genes to AT4G12710 (ath-e.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT4G12710 (ath-e.2 coexpression data)

CoexMap"826883"


athAT4G12710 | Entrez gene ID : 826883
Species ath ghi cit gma vvi ppo mtr sly sot nta sbi cre bra tae zma osa bdi hvu bna
Paralog 3 2 1 2 1 1 1 1 1 2 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
Protein NP_193007.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  chlo 2,  cysk 2,  cyto_pero 2,  cyto_E.R. 2  (predict for NP_193007.1)
Subcellular
localization
TargetP
other 9  (predict for NP_193007.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Condition-specific* Reference

ath-e.2
for
AT4G12710


ath-u.5
for
AT4G12710


ath-r.7
for
AT4G12710


ghi-r.1
for
107952835


ghi-r.1
for
107954700


cit-r.1
for
102608568


gma-u.5
for
100782472


gma-u.5
for
100785760


vvi-u.5
for
100261296


ppo-u.5
for
7469341


mtr-u.5
for
11408569


sly-u.5
for
101265841


sot-r.1
for
102606131


nta-r.1
for
107814322


nta-r.1
for
107825186



Ortholog ID: 14033
Species ath ghi ghi cit gma gma vvi ppo mtr sly sot nta nta
Symbol AT4G12710 LOC107952835 LOC107954700 LOC102608568 LOC100782472 LOC100785760 LOC100261296 LOC7469341 LOC11408569 LOC101265841 LOC102606131 LOC107814322 LOC107825186
Function* ARM repeat superfamily protein U-box domain-containing protein 15 U-box domain-containing protein 15 U-box domain-containing protein 3 U-box domain-containing protein 15 U-box domain-containing protein 15 U-box domain-containing protein 3 U-box domain-containing protein 15 U-box domain-containing protein 15 U-box domain-containing protein 3 U-box domain-containing protein 15 uncharacterized LOC107814322 uncharacterized LOC107825186
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00908 Zeatin biosynthesis 2
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 2
nta04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 826883 107952835 107954700 102608568 100782472 100785760 100261296 7469341 11408569 101265841 102606131 107814322 107825186
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